Software list

On Panthera cluster, we have installed many softwares, packages and libraries, all accessible via the module command. Find them in the below lists.

Work in progress!

At NHPCC, we are continuously adding softwares and libraries. Please contact us if you need a package that is not in the list.

List of modules available on the EPYC nodes of the Panthera cluster

Module name	Version(s)	description
abaqus	2022
Abseil	20230125.2-GCCcore-12.2.0	Abseil is an open-source collection of C++ library code designed to augment the C++ standard library. The Abseil library code is collected from Google's own C++ code base, has been extensively tested and used in production, and is the same code we depend on in our daily coding lives. Website
advisor	advisor_2020
AFLOWpi	1.3.1-Py3.7.4	Minimalist infrastructure for high-throughput calculations. Website
AIMAll	19.10.12
Anaconda3	2020.07 2021.11 2023.03-1 2023.07-2 2023.09-0 2024.02-1 2024.06-1	Built to complement the rich, open source Python community, the Anaconda platform provides an enterprise-ready data analytics platform that empowers companies to adopt a modern open data science analytics architecture. Website
ant	1.10.11-Java-11 1.10.12-Java-11	Apache Ant is a Java library and command-line tool whose mission is to drive processes described in build files as targets and extension points dependent upon each other. The main known usage of Ant is the build of Java applications. Website
AOCC	3.2.0-GCCcore-11 3.2.0 4.0.0 4.0.0 4.2.0	AMD Optimized C/C++ & Fortran compilers (AOCC) based on LLVM 14.0 Website
AOCL	3.2-AOCC 3.2 4.0-AOCC 4.0 4.2-AOCC 4.2	AOCL is a set of numerical libraries optimized for AMD processors. Website
apptainer	apptainer_func 1.2.5-unprivileged 1.3.4	Apptainer (formerly Singularity) simplifies the creation and execution of containers, ensuring software components are encapsulated for portability and reproducibility. ]) whatis([[Homepage: https://www.apptainer.org Website
archspec	0.1.3-GCC-11 0.1.3-GCCcore-11 0.1.4-GCCcore-12.2.0	A library for detecting, labeling, and reasoning about microarchitectures Website
Armadillo	11.4.3-foss-2022b	Armadillo is an open-source C++ linear algebra library (matrix maths) aiming towards a good balance between speed and ease of use. Integer, floating point and complex numbers are supported, as well as a subset of trigonometric and statistics functions. Website
arpack-ng	3.7.0-intel-2020b 3.8.0-foss-2022b	ARPACK is a collection of Fortran77 subroutines designed to solve large scale eigenvalue problems. Website
at-spi2-atk	2.38.0-GCCcore-12.2.0	AT-SPI 2 toolkit bridge Website
at-spi2-core	2.46.0-GCCcore-12.2.0	Assistive Technology Service Provider Interface. Website
ATK	2.38.0-GCC-11 2.38.0-GCCcore-11 2.38.0-GCCcore-12.2.0	ATK provides the set of accessibility interfaces that are implemented by other toolkits and applications. Using the ATK interfaces, accessibility tools have full access to view and control running applications. Website
Atomsk	0.13.1	Atomsk is a free, Open Source command-line program dedicated to the creation, manipulation, and conversion of data files for atomic-scale simulations in the field of computational materials sciences. Website
Autoconf	2.69-GCCcore-8.3.0 2.71-GCCcore-11.2.0 2.71-GCCcore-11.3.0 2.71-GCCcore-12.2.0 2.71	Autoconf is an extensible package of M4 macros that produce shell scripts to automatically configure software source code packages. These scripts can adapt the packages to many kinds of UNIX-like systems without manual user intervention. Autoconf creates a configuration script for a package from a template file that lists the operating system features that the package can use, in the form of M4 macro calls. Website
AutoDock	4.2.6-GCC-11 4.2.6-GCCcore-11	AutoDock is a suite of automated docking tools. It is designed to predict how small molecules, such as substrates or drug candidates, bind to a receptor of known 3D structure. Website
AutoDock-Vina	1.2.3-foss-2022a 1.2.5-foss-2022a	AutoDock Vina is an open-source program for doing molecular docking. Website
Automake	1.16.1-GCCcore-8.3.0 1.16.4-GCCcore-11.2.0 1.16.5-GCCcore-11.3.0 1.16.5-GCCcore-12.2.0 1.16.5	Automake: GNU Standards-compliant Makefile generator Website
autotools	1.0	Developer utilities
Autotools	20180311-GCCcore-8.3.0 20210726-GCCcore-11.2.0 20220317-GCCcore-11.3.0 20220317-GCCcore-12.2.0 20220317	This bundle collect the standard GNU build tools: Autoconf, Automake and libtool Website
Bazel	0.26.1-GCCcore-8.3.0 3.7.2-GCCcore-8.3.0 5.1.1-GCC-11 5.1.1-GCCcore-11 6.3.1-GCCcore-12.2.0	Bazel is a build tool that builds code quickly and reliably. It is used to build the majority of Google's software. Website
BeautifulSoup	4.10.0-GCC-11 4.10.0-GCCcore-11 4.11.1-GCCcore-12.2.0	Beautiful Soup is a Python library designed for quick turnaround projects like screen-scraping. Website
binutils	2.32-GCCcore-8.3.0 2.32 2.35-GCCcore-10.2.0 2.35 2.37-GCCcore-11.2.0 2.37 2.38-GCC-11 2.38-GCCcore-11 2.38-GCCcore-11.3.0 2.38 2.39-GCCcore-12.2.0 2.39 2.40-GCCcore-12.2.0 2.40	binutils: GNU binary utilities Website
Bison	3.3.2-GCCcore-8.3.0 3.3.2 3.7.1-GCCcore-10.2.0 3.7.6-GCCcore-11.2.0 3.8.2-GCC-11 3.8.2-GCCcore-11 3.8.2-GCCcore-11.3.0 3.8.2-GCCcore-12.2.0 3.8.2	Bison is a general-purpose parser generator that converts an annotated context-free grammar into a deterministic LR or generalized LR (GLR) parser employing LALR(1) parser tables. Website
BLACS	1.1-gompi-2022b	The BLACS (Basic Linear Algebra Communication Subprograms) project is an ongoing investigation whose purpose is to create a linear algebra oriented message passing interface that may be implemented efficiently and uniformly across a large range of distributed memory platforms. Website
BLIS	0.8.0-GCC-system 0.8.1-GCC-11.2.0 0.9.0-GCC-11 0.9.0-GCC-12.2.0 0.9.0-GCCcore-11	BLIS is a portable software framework for instantiating high-performance BLAS-like dense linear algebra libraries. Website
Blitz++	1.0.2-GCCcore-12.2.0	Blitz++ is a (LGPLv3+) licensed meta-template library for array manipulation in C++ with a speed comparable to Fortran implementations, while preserving an object-oriented interface Website
Boost	1.79.0-GCC-11 1.79.0-GCC-11.3.0 1.79.0-GCCcore-11 1.81.0-GCC-12.2.0	Boost provides free peer-reviewed portable C++ source libraries. Website
boost	1.80.0 1.80.0	Free peer-reviewed portable C++ source libraries
Brotli	1.0.9-GCC-11 1.0.9-GCCcore-10.2.0 1.0.9-GCCcore-11 1.0.9-GCCcore-11.2.0 1.0.9-GCCcore-12.2.0	Brotli is a generic-purpose lossless compression algorithm that compresses data using a combination of a modern variant of the LZ77 algorithm, Huffman coding and 2nd order context modeling, with a compression ratio comparable to the best currently available general-purpose compression methods. It is similar in speed with deflate but offers more dense compression. The specification of the Brotli Compressed Data Format is defined in RFC 7932. Website
Brunsli	0.1-GCCcore-12.2.0	Brunsli is a lossless JPEG repacking library. Website
bwidget	1.9.14-GCCcore-10.2.0 1.9.15-GCCcore-11	The BWidget Toolkit is a high-level Widget Set for Tcl/Tk built using native Tcl/Tk 8.x namespaces. Website
bzip2	1.0.6 1.0.8-GCC-11 1.0.8-GCCcore-8.3.0 1.0.8-GCCcore-10.2.0 1.0.8-GCCcore-11 1.0.8-GCCcore-11.2.0 1.0.8-GCCcore-11.3.0 1.0.8-GCCcore-12.2.0 1.0.8-GCCcore-13.2.0 1.0.8	bzip2 is a freely available, patent free, high-quality data compressor. It typically compresses files to within 10% to 15% of the best available techniques (the PPM family of statistical compressors), whilst being around twice as fast at compression and six times faster at decompression. Website
cairo	1.16.0-GCCcore-10.2.0 1.16.0-GCCcore-11.2.0 1.17.4-GCC-11 1.17.4-GCCcore-11 1.17.4-GCCcore-12.2.0	Cairo is a 2D graphics library with support for multiple output devices. Currently supported output targets include the X Window System (via both Xlib and XCB), Quartz, Win32, image buffers, PostScript, PDF, and SVG file output. Experimental backends include OpenGL, BeOS, OS/2, and DirectFB Website
Catch2	2.13.9-GCCcore-12.2.0	A modern, C++-native, header-only, test framework for unit-tests, TDD and BDD - using C++11, C++14, C++17 and later Website
CFITSIO	4.2.0-GCC-11 4.2.0-GCCcore-11 4.2.0-GCCcore-12.2.0	CFITSIO is a library of C and Fortran subroutines for reading and writing data files in FITS (Flexible Image Transport System) data format. Website
cfx	22.1
CGAL	4.14.3-gompi-2022a	The goal of the CGAL Open Source Project is to provide easy access to efficient and reliable geometric algorithms in the form of a C++ library. Website
Clang	16.0.4-GCCcore-12.2.0	C, C++, Objective-C compiler, based on LLVM. Does not include C++ standard library -- use libstdc++ from GCC. Website
clck	clck_2019 2019.10
CLHEP	2.4.5.3-GCC-11 2.4.5.3-GCCcore-11 2.4.6.2-GCC-11 2.4.6.2-GCC-12.2.0	The CLHEP project is intended to be a set of HEP-specific foundation and utility classes such as random generators, physics vectors, geometry and linear algebra. CLHEP is structured in a set of packages independent of any external package. Website
CloudCompare	2.12.4-foss-2021b	3D point cloud and mesh processing software Website
cmake	3.24.2 3.25.3 3.26.4	CMake is an open-source, cross-platform family of tools designed to build, test and package software.
CMake	3.15.3-GCCcore-8.3.0 3.18.4-GCCcore-10.2.0 3.18.4 3.21.1-GCCcore-11.2.0 3.22.1-GCCcore-11.2.0 3.23.1-GCCcore-11.3.0 3.23.1-GCCcore-12.2.0 3.24.3-GCCcore-12.2.0 3.27.6-GCCcore-13.2.0	CMake, the cross-platform, open-source build system. CMake is a family of tools designed to build, test and package software. Website
compiler	2020.4 2023.0.0
compiler-rt	2023.0.0
compiler-rt32	2023.0.0
compiler32	2023.0.0
comsol	5.6 6.1 6.2
conan	1.58.0-GCCcore-11.3.0 1.60.2-GCCcore-12.2.0	Decentralized, open-source (MIT), C/C++ package manager. Website
conda-env-mod	default
converge	2.4	CONVERGE CFD software is a multi-purpose computational fluid dynamics code for modeling three-dimensional, reacting or non-reacting, turbulent flows. Website
converge-studio	2.4	CONVERGE Studio is graphical user interface for CONVERGE CFD software. Website
CoordgenLibs	3.0.1-gompi-2022a	Schrodinger-developed 2D Coordinate Generation Website
cppy	1.2.1-GCCcore-11	A small C++ header library which makes it easier to write Python extension modules. The primary feature is a PyObject smart pointer which automatically handles reference counting and provides convenience methods for performing common object operations. Website
CQRlib	1.1.4	CQRlib -- ANSI C API for Quaternion Rotations. Website
CUDA	10.0.130 10.1.243-GCC-8.3.0 10.1.243 11.4 11.7.0 11.8.0 12.0.0 12.1.1 12.2.0 12.2.2 12.3.0	CUDA (formerly Compute Unified Device Architecture) is a parallel computing platform and programming model created by NVIDIA and implemented by the graphics processing units (GPUs) that they produce. CUDA gives developers access to the virtual instruction set and memory of the parallel computational elements in CUDA GPUs. Website
cuDNN	7.4.2.24-CUDA-10.0.130 7.6.4.38-gcccuda-2019b 7.6.5.32-CUDA-10.1.243 7.6.5.32-gcccuda-2019b 8.4.1.50-CUDA-11.7.0 8.7.0.84-CUDA-11.8.0 8.7.0.84-CUDA-12.0.0 8.9.2.26-CUDA-12.1.1 8.9.2.26-CUDA-12.2.0 8.9.2.26-CUDA-12.3.0 9.1.0.70-CUDA-12.3.0	The NVIDIA CUDA Deep Neural Network library (cuDNN) is a GPU-accelerated library of primitives for deep neural networks. Website
cURL	7.52.1-intel-2020b 7.63.0 7.66.0-GCCcore-8.3.0 7.72.0-GCCcore-10.2.0 7.78.0-GCCcore-11.2.0 7.83.0-GCC-11 7.83.0-GCCcore-11 7.83.0-GCCcore-11.3.0 7.83.0-GCCcore-12.2.0 7.86.0-GCCcore-12.2.0 8.3.0-GCCcore-13.2.0	libcurl is a free and easy-to-use client-side URL transfer library, supporting DICT, FILE, FTP, FTPS, Gopher, HTTP, HTTPS, IMAP, IMAPS, LDAP, LDAPS, POP3, POP3S, RTMP, RTSP, SCP, SFTP, SMTP, SMTPS, Telnet and TFTP. libcurl supports SSL certificates, HTTP POST, HTTP PUT, FTP uploading, HTTP form based upload, proxies, cookies, user+password authentication (Basic, Digest, NTLM, Negotiate, Kerberos), file transfer resume, http proxy tunneling and more. Website
custom	{{ no such element: dict object['versionName'] }}	This module sets up my custom command and creates a user-specific directory
DB	18.1.32-GCCcore-8.3.0 18.1.40-GCC-11 18.1.40-GCCcore-10.2.0 18.1.40-GCCcore-11 18.1.40-GCCcore-11.2.0 18.1.40-GCCcore-11.3.0 18.1.40-GCCcore-12.2.0	Berkeley DB enables the development of custom data management solutions, without the overhead traditionally associated with such custom projects. Website
DBD-mysql	4.050-GCC-11.3.0	Perl binding for MySQL Website
DBus	1.13.18-GCCcore-11.2.0 1.14.0-GCC-11 1.14.0-GCCcore-11 1.14.0-GCCcore-12.2.0 1.15.2-GCCcore-12.2.0	D-Bus is a message bus system, a simple way for applications to talk to one another. In addition to interprocess communication, D-Bus helps coordinate process lifecycle; it makes it simple and reliable to code a "single instance" application or daemon, and to launch applications and daemons on demand when their services are needed. Website
debugger	2020.4 2023.0.0
def	{{ no such element: dict object['versionName'] }}
dev-utilities	2021.8.0
dill	0.3.6-GCC-11 0.3.6-GCCcore-11	dill extends python's pickle module for serializing and de-serializing python objects to the majority of the built-in python types. Serialization is the process of converting an object to a byte stream, and the inverse of which is converting a byte stream back to on python object hierarchy. Website
DL_POLY_4	5.0.0-intel-2020b	DL_POLY is a general purpose classical molecular dynamics (MD) simulation software Website
dotNET-SDK	3.1.300-linux-x64 6.0.101-linux-x64 8.0.302-linux-x64	.NET is a free, cross-platform, open source developer platform for building many different types of applications. Website
double-conversion	3.1.5-GCCcore-11.2.0 3.2.0-GCC-11 3.2.0-GCCcore-11 3.2.0-GCCcore-12.2.0 3.2.1-GCCcore-12.2.0	Efficient binary-decimal and decimal-binary conversion routines for IEEE doubles. Website
Doxygen	1.8.16-GCCcore-8.3.0 1.8.20-GCCcore-10.2.0 1.9.1-GCCcore-11.2.0 1.9.4-GCC-11 1.9.4-GCCcore-11 1.9.5-GCCcore-12.2.0	Doxygen is a documentation system for C++, C, Java, Objective-C, Python, IDL (Corba and Microsoft flavors), Fortran, VHDL, PHP, C#, and to some extent D. Website
EasyBuild	4.8.0 4.8.1 4.8.2 4.9.0 4.9.1 4.9.4	EasyBuild is a software build and installation framework written in Python that allows you to install software in a structured, repeatable and robust way. Website
Eigen	3.3.7 3.3.8-GCCcore-10.2.0 3.3.9-GCCcore-11.2.0 3.4.0-GCC-11 3.4.0-GCCcore-11 3.4.0-GCCcore-11.2.0 3.4.0-GCCcore-12.2.0	Eigen is a C++ template library for linear algebra: matrices, vectors, numerical solvers, and related algorithms. Website
ELC	7.0
elfutils	0.189-GCCcore-12.2.0	The elfutils project provides libraries and tools for ELF files and DWARF data. Website
Elmer	9.0-foss-2022b	Elmer is an open source multiphysical simulation software mainly developed by CSC - IT Center for Science (CSC). Elmer includes physical models of fluid dynamics, structural mechanics, electromagnetics, heat transfer and acoustics, for example. These are described by partial differential equations which Elmer solves by the Finite Element Method (FEM). Website
ELPA	2019.11.001-intel-2020b 2021.05.001-foss-2021b 2021.11.001-foss-2022a 2021.11.001-intel-2023a 2022.05.001-foss-2022b	Eigenvalue SoLvers for Petaflop-Applications. Website
exciting	25Mar2023-intel-2023a
expat	2.2.6 2.2.7-GCCcore-8.3.0 2.2.9-GCCcore-10.2.0 2.4.1-GCCcore-11.2.0 2.4.8-GCC-11 2.4.8-GCCcore-11 2.4.8-GCCcore-11.3.0 2.4.8-GCCcore-12.2.0 2.4.9-GCCcore-12.2.0	Expat is an XML parser library written in C. It is a stream-oriented parser in which an application registers handlers for things the parser might find in the XML document (like start tags). Website
expecttest	0.1.3-GCC-11 0.1.3-GCCcore-11 0.1.3-GCCcore-12.2.0	This library implements expect tests (also known as "golden" tests). Expect tests are a method of writing tests where instead of hard-coding the expected output of a test, you run the test to get the output, and the test framework automatically populates the expected output. If the output of the test changes, you can rerun the test with the environment variable EXPECTTEST_ACCEPT=1 to automatically update the expected output. Website
fenicsx	0.9.0-py3.11.8	FEniCS is a popular open-source computing platform for solving PDEs with the finite element method (FEM). Website
FFmpeg	4.4.2-GCC-11 4.4.2-GCCcore-11 5.1.2-GCCcore-12.2.0	A complete, cross-platform solution to record, convert and stream audio and video. Website
ffnvcodec	11.1.5.2	FFmpeg nvidia headers. Adds support for nvenc and nvdec. Requires Nvidia GPU and drivers to be present (picked up dynamically). Website
FFTW	3.3.8-gompi-2020b 3.3.8-gompi-2020 3.3.8-gompic-2019b 3.3.10-GCC-11 3.3.10-GCC-12.2.0 3.3.10-GCCcore-11 3.3.10-gompi-2021b 3.3.10-NVHPC-22.7-CUDA-11.7.0	FFTW is a C subroutine library for computing the discrete Fourier transform (DFT) in one or more dimensions, of arbitrary input size, and of both real and complex data. Website
FFTW.MPI	3.3.10-gompi-2022a 3.3.10-gompi-2022b 3.3.10-nvompi-2022.07	FFTW is a C subroutine library for computing the discrete Fourier transform (DFT) in one or more dimensions, of arbitrary input size, and of both real and complex data. Website
FLAC	1.3.4-GCC-11 1.3.4-GCCcore-11	FLAC stands for Free Lossless Audio Codec, an audio format similar to MP3, but lossless, meaning that audio is compressed in FLAC without any loss in quality. Website
flatbuffers	2.0.7-GCC-11 2.0.7-GCCcore-11	FlatBuffers: Memory Efficient Serialization Library Includes the Flatbuffers compiler, C/C++ bindings and Python runtime library. Website
flatbuffers-python	2.0-GCCcore-11 23.1.4-GCCcore-12.2.0	Python Flatbuffers runtime library. Website
flex	2.6.4-GCCcore-8.3.0 2.6.4-GCCcore-10.2.0 2.6.4-GCCcore-11.2.0 2.6.4-GCCcore-11.3.0 2.6.4-GCCcore-12.2.0 2.6.4	Flex (Fast Lexical Analyzer) is a tool for generating scanners. A scanner, sometimes called a tokenizer, is a program which recognizes lexical patterns in text. Website
FlexiBLAS	3.0.4-GCC-system 3.0.4-GCC-11.2.0 3.2.0-NVHPC-22.7-CUDA-11.7.0 3.2.1-GCC-11 3.2.1-GCC-12.2.0 3.2.1-GCCcore-11	FlexiBLAS is a wrapper library that enables the exchange of the BLAS and LAPACK implementation used by a program without recompiling or relinking it. Website
flook	0.8.1-iccifort-2020.4.304 0.8.4-iccifort-2020.4.304	The fortran-Lua-hook library. Website
FLTK	1.3.8-GCCcore-12.2.0	FLTK is a cross-platform C++ GUI toolkit for UNIX/Linux (X11), Microsoft Windows, and MacOS X. FLTK provides modern GUI functionality without the bloat and supports 3D graphics via OpenGL and its built-in GLUT emulation. Website
fluent	6.3.26 22.1
fontconfig	2.13.92-GCCcore-10.2.0 2.13.94-GCCcore-11.2.0 2.14.0-GCC-11 2.14.0-GCCcore-11 2.14.0-GCCcore-12.2.0 2.14.1-GCCcore-12.2.0	Fontconfig is a library designed to provide system-wide font configuration, customization and application access. Website
foss	2020b 2020 2021b 2022a 2022b	GNU Compiler Collection (GCC) based compiler toolchain, including OpenMPI for MPI support, OpenBLAS (BLAS and LAPACK support), FFTW and ScaLAPACK. Website
fosscuda	2019b	GCC based compiler toolchain with CUDA support, and including OpenMPI for MPI support, OpenBLAS (BLAS and LAPACK support), FFTW and ScaLAPACK. Website
freeglut	3.2.2-GCC-11 3.2.2-GCCcore-11	freeglut is a completely OpenSourced alternative to the OpenGL Utility Toolkit (GLUT) library. Website
FreeImage	3.18.0-GCCcore-12.2.0	FreeImage is an Open Source library project for developers who would like to support popular graphics image formats like PNG, BMP, JPEG, TIFF and others as needed by today's multimedia applications. FreeImage is easy to use, fast, multithreading safe. Website
freetype	2.10.3-GCCcore-10.2.0 2.11.0-GCCcore-11.2.0 2.12.1-GCC-11 2.12.1-GCCcore-11 2.12.1-GCCcore-12.2.0	FreeType 2 is a software font engine that is designed to be small, efficient, highly customizable, and portable while capable of producing high-quality output (glyph images). It can be used in graphics libraries, display servers, font conversion tools, text image generation tools, and many other products as well. Website
FriBidi	1.0.12-GCC-11 1.0.12-GCCcore-11 1.0.12-GCCcore-12.2.0	The Free Implementation of the Unicode Bidirectional Algorithm. Website
futile	1.8.3-foss-2022b	The FUTILE project (Fortran Utilities for the Treatment of Innermost Level of Executables) is a set of modules and wrapper that encapsulate the most common low-level operations of a Fortran code. Website
G4make	11.0.2 11.1.2 11.2.1
gambit	2.6.4 2.6.4
GATE	9.2-foss-2022a	GATE is an advanced opensource software developed by the international OpenGATE collaboration and dedicated to the numerical simulations in medical imaging. It currently supports simulations of Emission Tomography (Positron Emission Tomography - PET and Single Photon Emission Computed Tomography - SPECT), and Computed Tomography Website
gaussian	g09D1 g16C1
GCC	system 8.3.0 10.2.0 11 11.2.0 11.3.0 12.2.0	The GNU Compiler Collection includes front ends for C, C++, Objective-C, Fortran, Java, and Ada, as well as libraries for these languages (libstdc++, libgcj,...). Website
gcc	12.2.0	GNU Compiler Family (C/C++/Fortran for x86_64) Website
GCCcore	system 8.3.0 10.2.0 11 11.2.0 11.3.0 12.2.0 13.2.0	The GNU Compiler Collection includes front ends for C, C++, Objective-C, Fortran, Java, and Ada, as well as libraries for these languages (libstdc++, libgcj,...). Website
gcccuda	2019b	GNU Compiler Collection (GCC) based compiler toolchain, along with CUDA toolkit. Website
GDAL	3.0.0-foss-2020-Python-2.7.15 3.2.1-foss-2020b 3.3.2-foss-2021b 3.5.0-foss-2022a 3.6.2-foss-2022b	GDAL is a translator library for raster geospatial data formats that is released under an X/MIT style Open Source license by the Open Source Geospatial Foundation. As a library, it presents a single abstract data model to the calling application for all supported formats. It also comes with a variety of useful commandline utilities for data translation and processing. Website
Gdk-Pixbuf	2.42.8-GCC-11 2.42.10-GCCcore-12.2.0	The Gdk Pixbuf is a toolkit for image loading and pixel buffer manipulation. It is used by GTK+ 2 and GTK+ 3 to load and manipulate images. In the past it was distributed as part of GTK+ 2 but it was split off into a separate package in preparation for the change to GTK+ 3. Website
GDRCopy	2.3-GCC-11 2.3-GCCcore-11 2.3-GCCcore-12.2.0	A low-latency GPU memory copy library based on NVIDIA GPUDirect RDMA technology. Website
Geant4	11.0.2-GCC-11 11.1.2-GCC-11 11.2.1-GCC-11	Geant4 is a toolkit for the simulation of the passage of particles through matter. Its areas of application include high energy, nuclear and accelerator physics, as well as studies in medical and space science. Website
Geant4-data	11.0 11.1 11.2	Datasets for Geant4. Website
genomap	1.3.6-TF2.15.0-Torch2.2	Genomap is an entropy-based cartography strategy to contrive the high dimensional gene expression data into a configured image format with explicit integration of the genomic interactions.
GEOS	3.7.2-foss-2020-Python-2.7.15 3.9.1-GCC-10.2.0 3.9.1-GCC-11.2.0 3.10.3-GCC-11 3.10.3-GCCcore-11 3.11.1-GCC-12.2.0	GEOS (Geometry Engine - Open Source) is a C++ port of the Java Topology Suite (JTS) Website
gettext	0.19.8.1 0.21-GCC-11 0.21-GCCcore-10.2.0 0.21-GCCcore-11 0.21-GCCcore-11.2.0 0.21-GCCcore-11.3.0 0.21-GCCcore-12.2.0 0.21 0.21.1-GCCcore-12.2.0 0.21.1 0.22	GNU 'gettext' is an important step for the GNU Translation Project, as it is an asset on which we may build many other steps. This package offers to programmers, translators, and even users, a well integrated set of tools and documentation Website
gfbf	2022b	GNU Compiler Collection (GCC) based compiler toolchain, including FlexiBLAS (BLAS and LAPACK support) and (serial) FFTW. Website
Ghostscript	9.53.3-GCCcore-10.2.0 9.56.1-GCC-11 9.56.1-GCCcore-11 10.0.0-GCCcore-12.2.0	Ghostscript is a versatile processor for PostScript data with the ability to render PostScript to different targets. It used to be part of the cups printing stack, but is no longer used for that. Website
giflib	5.2.1-GCC-11 5.2.1-GCCcore-11 5.2.1-GCCcore-12.2.0	giflib is a library for reading and writing gif images. It is API and ABI compatible with libungif which was in wide use while the LZW compression algorithm was patented. Website
git	2.36.0-GCCcore-11.3.0-nodocs	Git is a free and open source distributed version control system designed to handle everything from small to very large projects with speed and efficiency. Website
GL2PS	1.4.2-GCC-11 1.4.2-GCCcore-11	GL2PS: an OpenGL to PostScript printing library Website
GLib	2.66.1-GCCcore-10.2.0 2.69.1-GCCcore-11.2.0 2.72.1-GCC-11 2.72.1-GCCcore-11 2.72.1-GCCcore-12.2.0 2.75.0-GCCcore-12.2.0	GLib is one of the base libraries of the GTK+ project Website
glibc	2.34	The GNU C Library project provides the core libraries for the GNU system and GNU/Linux systems, as well as many other systems that use Linux as the kernel. Website
GLPK	5.0-GCC-11 5.0-GCCcore-11	The GLPK (GNU Linear Programming Kit) package is intended for solving large-scale linear programming (LP), mixed integer programming (MIP), and other related problems. It is a set of routines written in ANSI C and organized in the form of a callable library. Website
GMP	6.1.2-GCCcore-8.3.0 6.1.2 6.2.0-GCCcore-10.2.0 6.2.1-GCC-11 6.2.1-GCCcore-11 6.2.1-GCCcore-11.2.0 6.2.1-GCCcore-11.3.0 6.2.1-GCCcore-12.2.0 6.2.1-intel2023a	GMP is a free library for arbitrary precision arithmetic, operating on signed integers, rational numbers, and floating point numbers. Website
gmpy2	2.1.5-GCC-12.2.0	GMP/MPIR, MPFR, and MPC interface to Python 2.6+ and 3.x Website
gmsh	4.12.2-foss-2022b	Gmsh is a 3D finite element grid generator with a build-in CAD engine and post-processor. Website
GMT	5.4.5-foss-2020 6.2.0-foss-2020b 6.2.0-foss-2020 6.4.0-foss-2022a	GMT is an open source collection of about 80 command-line tools for manipulating geographic and Cartesian data sets (including filtering, trend fitting, gridding, projecting, etc.) and producing PostScript illustrations ranging from simple x-y plots via contour maps to artificially illuminated surfaces and 3D perspective views; the GMT supplements add another 40 more specialized and discipline-specific tools. Website
GMTSAR	6.1-foss-2020 6.2.2-foss-2020 6.3-foss-2020	GMTSAR is an open source (GNU General Public License) InSAR processing system designed for users familiar with Generic Mapping Tools (GMT). The code is written in C and will compile on any computer where GMT and NETCDF are installed. The system has three main components: ...
gnu12	12.2.0	GNU Compiler Family (C/C++/Fortran for x86_64) Website
gnuplot	5.4.4-GCC-11 5.4.4-GCCcore-11	Portable interactive, function plotting utility Website
Go	1.21.2	Go is an open source programming language that makes it easy to build simple, reliable, and efficient software. Website
GObject-Introspection	1.68.0-GCCcore-11.2.0 1.72.0-GCCcore-11 1.72.0-GCCcore-12.2.0 1.74.0-GCCcore-12.2.0	GObject introspection is a middleware layer between C libraries (using GObject) and language bindings. The C library can be scanned at compile time and generate a metadata file, in addition to the actual native C library. Then at runtime, language bindings can read this metadata and automatically provide bindings to call into the C library. Website
gompi	system 2020b 2020 2021b 2022a 2022b	GNU Compiler Collection (GCC) based compiler toolchain, including OpenMPI for MPI support. Website
gompic	2019b	GNU Compiler Collection (GCC) based compiler toolchain along with CUDA toolkit, including OpenMPI for MPI support with CUDA features enabled. Website
googletest	1.10.0-GCCcore-10.2.0 1.11.0-GCC-11 1.11.0-GCCcore-11 1.12.1-GCCcore-12.2.0	Google's framework for writing C++ tests on a variety of platforms Website
gperf	3.1-GCC-11 3.1-GCCcore-10.2.0 3.1-GCCcore-11 3.1-GCCcore-11.2.0 3.1-GCCcore-12.2.0	GNU gperf is a perfect hash function generator. For a given list of strings, it produces a hash function and hash table, in form of C or C++ code, for looking up a value depending on the input string. The hash function is perfect, which means that the hash table has no collisions, and the hash table lookup needs a single string comparison only. Website
GPUMD	3.9.1-plumed 3.9.1	GPUMD is a highly efficient general-purpose molecular dynamic (MD) package fully implemented on graphics processing units (GPUs). ]) whatis([[Homepage: https://gpumd.org Website
Grace	5.1.25-foss-2022a	Grace is a WYSIWYG tool to make two-dimensional plots of numerical data. Website
Graphene	1.10.8-GCCcore-12.2.0	Graphene is a thin layer of types for graphic libraries Website
graphite2	1.3.14-GCC-11 1.3.14-GCCcore-11 1.3.14-GCCcore-11.2.0 1.3.14-GCCcore-12.2.0	Graphite is a "smart font" system developed specifically to handle the complexities of lesser-known languages of the world. Website
groff	1.22.4-GCCcore-8.3.0 1.22.4-GCCcore-11.2.0 1.22.4-GCCcore-11.3.0 1.22.4-GCCcore-12.2.0	Groff (GNU troff) is a typesetting system that reads plain text mixed with formatting commands and produces formatted output. Website
GROMACS	2021.5-foss-2022a-PLUMED-2.8.0 2023.1-foss-2022a-CUDA-11.7.0 2023.1-foss-2022a-CUDA-11.8.0 2023.1-foss-2022a 2023.3-foss-2022a-CUDA-11.7.0	GROMACS is a versatile package to perform molecular dynamics, i.e. simulate the Newtonian equations of motion for systems with hundreds to millions of particles. This is a GPU enabled build, containing both MPI and threadMPI binaries. It also contains the gmxapi extension for the single precision MPI build. Website
gsasl	2.2.1	GNU SASL is an implementation of the Simple Authentication and Security Layer framework and a few common SASL mechanisms. Website
GSL	2.6-GCC-8.3.0 2.7-GCC-11 2.7-GCC-12.2.0	The GNU Scientific Library (GSL) is a numerical library for C and C++ programmers. The library provides a wide range of mathematical routines such as random number generators, special functions and least-squares fitting. Website
GST-plugins-bad	1.22.5-GCC-12.2.0	GStreamer is a library for constructing graphs of media-handling components. The applications it supports range from simple Ogg/Vorbis playback, audio/video streaming to complex audio (mixing) and video (non-linear editing) processing. Website
GST-plugins-base	0.10.36 1.22.1-GCC-12.2.0	GStreamer is a library for constructing graphs of media-handling components. The applications it supports range from simple Ogg/Vorbis playback, audio/video streaming to complex audio (mixing) and video (non-linear editing) processing. Website
GStreamer	0.10.36 1.22.1-GCC-12.2.0	GStreamer is a library for constructing graphs of media-handling components. The applications it supports range from simple Ogg/Vorbis playback, audio/video streaming to complex audio (mixing) and video (non-linear editing) processing. Website
GTK2	2.24.33-GCC-11 2.24.33-GCCcore-11	The GTK+ 2 package contains libraries used for creating graphical user interfaces for applications. Website
GTK3	3.24.35-GCCcore-12.2.0	GTK+ is the primary library used to construct user interfaces in GNOME. It provides all the user interface controls, or widgets, used in a common graphical application. Its object-oriented API allows you to construct user interfaces without dealing with the low-level details of drawing and device interaction. Website
GTK4	4.11.3-GCC-12.2.0	GTK+ is the primary library used to construct user interfaces in GNOME. It provides all the user interface controls, or widgets, used in a common graphical application. Its object-oriented API allows you to construct user interfaces without dealing with the low-level details of drawing and device interaction. Website
h5py	2.10.0-fosscuda-2019b-Python-3.7.4 3.7.0-foss-2022a	HDF5 for Python (h5py) is a general-purpose Python interface to the Hierarchical Data Format library, version 5. HDF5 is a versatile, mature scientific software library designed for the fast, flexible storage of enormous amounts of data. Website
HarfBuzz	2.8.2-GCCcore-11.2.0 4.2.1-GCC-11 4.2.1-GCCcore-11 4.2.1-GCCcore-12.2.0 5.3.1-GCCcore-12.2.0	HarfBuzz is an OpenType text shaping engine. Website
hatchling	1.18.0-GCCcore-12.2.0	Extensible, standards compliant build backend used by Hatch, a modern, extensible Python project manager. Website
HDF	4.2.15-GCC-11 4.2.15-GCCcore-10.2.0 4.2.15-GCCcore-11 4.2.15-GCCcore-11.2.0 4.2.15-GCCcore-12.2.0	HDF (also known as HDF4) is a library and multi-object file format for storing and managing data between machines. Website
HDF5	1.8.16-intel-2020b 1.8.20-intel-2020b 1.10.2-intel-2020b 1.10.5-gompi-2020 1.10.5-gompic-2019b 1.10.5-iimpi-2020b 1.10.5-intel-2020b 1.10.7-gompi-2020b 1.12.1-gompi-2021b 1.12.2-gompi-system 1.12.2-gompi-2022a 1.12.2-gompi-2022b 1.12.2-iimpi-2020b 1.12.2-iimpi-2023a 1.14.0-gompi-2022a 1.14.0-gompi-2022b 1.14.0-iimpi-2023a	HDF5 is a data model, library, and file format for storing and managing data. It supports an unlimited variety of datatypes, and is designed for flexible and efficient I/O and for high volume and complex data. Website
help2man	1.47.16-GCCcore-10.2.0 1.49.2-GCCcore-11.3.0	help2man produces simple manual pages from the '--help' and '--version' output of other commands. Website
Highway	1.0.3-GCCcore-12.2.0	Highway is a C++ library for SIMD (Single Instruction, Multiple Data), i.e. applying the same operation to 'lanes'. Website
hwloc	1.11.12-GCCcore-8.3.0 2.2.0-GCCcore-10.2.0 2.5.0-GCCcore-11.2.0 2.7.0 2.7.1-GCCcore-11.3.0 2.8.0-GCCcore-12.2.0 2.9.0	Portable Hardware Locality
hypothesis	5.41.2-GCCcore-10.2.0 6.14.6-GCCcore-11.2.0 6.46.7-GCC-11 6.46.7-GCCcore-11 6.68.2-GCCcore-12.2.0	Hypothesis is an advanced testing library for Python. It lets you write tests which are parametrized by a source of examples, and then generates simple and comprehensible examples that make your tests fail. This lets you find more bugs in your code with less work. Website
Hypre	2.27.0-foss-2022b	Hypre is a library for solving large, sparse linear systems of equations on massively parallel computers. The problems of interest arise in the simulation codes being developed at LLNL and elsewhere to study physical phenomena in the defense, environmental, energy, and biological sciences. Website
hypre	2.18.1 2.18.1	Scalable algorithms for solving linear systems of equations
icc	2023.0.0
icc32	2023.0.0
iccifort	2020.4.304	Intel C, C++ & Fortran compilers Website
ICU	67.1-GCCcore-10.2.0 69.1-GCCcore-11.2.0 71.1-GCC-11 71.1-GCCcore-11 71.1-GCCcore-11.3.0 71.1-GCCcore-12.2.0 72.1-GCCcore-12.2.0	ICU is a mature, widely used set of C/C++ and Java libraries providing Unicode and Globalization support for software applications. Website
iimpi	2020b 2023a	Intel C/C++ and Fortran compilers, alongside Intel MPI. Website
ImageMagick	7.1.0-37-GCC-11 7.1.0-37-GCCcore-11 7.1.0-53-GCCcore-12.2.0	ImageMagick is a software suite to create, edit, compose, or convert bitmap images Website
imake	1.0.8-GCCcore-11.2.0	imake is a Makefile-generator that is intended to make it easier to develop software portably for multiple systems. Website
Imath	3.1.6-GCCcore-12.2.0	Imath is a C++ and python library of 2D and 3D vector, matrix, and math operations for computer graphics Website
imb	2019.7.304	Intel MPI Benchmarks (IMB)
imkl	2020.4.304-iimpi-2020b 2023.0.0	Intel oneAPI Math Kernel Library Website
imkl-FFTW	2023.0.0-iimpi-2023a	FFTW interfaces using Intel oneAPI Math Kernel Library Website
impi	2019.9.304-iccifort-2020.4.304 2021.7.0 2021.8.0-intel-compilers-2023.0.0 2021.8.0 2021.8.0	Intel MPI Library (C/C++/Fortran for x86_64) Website
init_opencl	2023.0.0
inspector	inspector_2020
intel	2020b 2020.4 2021.2.0 2023a 2023.0.0	Intel(R) Compiler Family (C/C++/Fortran for x86_64) Website
intel-compilers	2023.0.0	Intel C, C++ & Fortran compilers (classic and oneAPI) Website
intel2020	2020.4	Intel(R) Compiler Family (C/C++/Fortran for x86_64) Website
intltool	0.51.0-GCC-11 0.51.0-GCCcore-10.2.0 0.51.0-GCCcore-11 0.51.0-GCCcore-11.2.0 0.51.0-GCCcore-12.2.0	intltool is a set of tools to centralize translation of many different file formats using GNU gettext-compatible PO files. Website
IPython	8.5.0-GCC-11 8.5.0-GCCcore-11 8.14.0-GCCcore-12.2.0	IPython provides a rich architecture for interactive computing with: Powerful interactive shells (terminal and Qt-based). A browser-based notebook with support for code, text, mathematical expressions, inline plots and other rich media. Support for interactive data visualization and use of GUI toolkits. Flexible, embeddable interpreters to load into your own projects. Easy to use, high performance tools for parallel computing. Website
itac	intel64
ITK	5.2.1-foss-2022a	Insight Segmentation and Registration Toolkit (ITK) provides an extensive suite of software tools for registering and segmenting multidimensional imaging data. Website
ITK-SNAP	4.0.2	A software application used to segment structures in 3D and 4D biomedical images. Website
jansson	2.14
JasPer	2.0.14 2.0.24-GCCcore-10.2.0 2.0.33-GCC-11 2.0.33-GCCcore-11 2.0.33-GCCcore-11.2.0 4.0.0-GCCcore-12.2.0	The JasPer Project is an open-source initiative to provide a free software-based reference implementation of the codec specified in the JPEG-2000 Part-1 standard. Website
Java	1.8.0_311 11.0.20	Java Platform, Standard Edition (Java SE) lets you develop and deploy Java applications on desktops and servers. Website
jax	0.4.28-Py3.10.8	JAX is a Python library for accelerator-oriented array computation and program transformation, designed for high-performance numerical computing and large-scale machine learning.
jax-am	{{ no such element: dict object['versionName'] }}	JAX-AM is a collection of several numerical tools, currently including DEM, LBM, CFD, PFM, FEM.
jax-fem	{{ no such element: dict object['versionName'] }}	A GPU-accelerated differentiable finite element analysis package based on JAX.
jbigkit	2.1-GCC-11 2.1-GCCcore-10.2.0 2.1-GCCcore-11 2.1-GCCcore-11.2.0 2.1-GCCcore-12.2.0	JBIG-KIT is a software implementation of the JBIG1 data compression standard (ITU-T T.82), which was designed for bi-level image data, such as scanned documents. Website
jemalloc	5.2.1 5.3.0-GCCcore-11 5.3.0-GCCcore-11.3.0 5.3.0-GCCcore-12.2.0	jemalloc is a general purpose malloc(3) implementation that emphasizes fragmentation avoidance and scalable concurrency support. Website
json-c	0.16-GCCcore-12.2.0	JSON-C implements a reference counting object model that allows you to easily construct JSON objects in C, output them as JSON formatted strings and parse JSON formatted strings back into the C representation of JSON objects. Website
JsonCpp	1.9.5-GCC-11 1.9.5-GCCcore-11	JsonCpp is a C++ library that allows manipulating JSON values, including serialization and deserialization to and from strings. It can also preserve existing comment in unserialization/serialization steps, making it a convenient format to store user input files. Website
Judy	1.0.5-GCCcore-11.3.0	A C library that implements a dynamic array. Website
Julia	1.7.3-linux-x86_64 1.9.3-linux-x86_64 1.10.5-linux-x86_64 1.11.1-linux-x86_64	Julia is a high-level, high-performance dynamic programming language for numerical computing Website
jupyter-server	1.21.0-GCC-11 1.21.0-GCCcore-11 2.7.0-GCCcore-12.2.0	The Jupyter Server provides the backend (i.e. the core services, APIs, and REST endpoints) for Jupyter web applications like Jupyter notebook, JupyterLab, and Voila. Website
JupyterLab	3.5.0-GCC-11 3.5.0-GCCcore-11 4.0.3-GCCcore-12.2.0	JupyterLab is the next-generation user interface for Project Jupyter offering all the familiar building blocks of the classic Jupyter Notebook (notebook, terminal, text editor, file browser, rich outputs, etc.) in a flexible and powerful user interface. JupyterLab will eventually replace the classic Jupyter Notebook. Website
JupyterNotebook	7.0.3-GCCcore-12.2.0	The Jupyter Notebook is the original web application for creating and sharing computational documents. It offers a simple, streamlined, document-centric experience. Website
kim-api	2.3.0-GCC-11 2.3.0-GCC-12.2.0	Open Knowledgebase of Interatomic Models. KIM is an API and OpenKIM is a collection of interatomic models (potentials) for atomistic simulations. This is a library that can be used by simulation programs to get access to the models in the OpenKIM database. This EasyBuild only installs the API, the models can be installed with the package openkim-models, or the user can install them manually by running kim-api-collections-management install user MODELNAME or kim-api-collections-management install user OpenKIM to install them all. Website
LAME	3.100-GCC-11 3.100-GCCcore-11 3.100-GCCcore-12.2.0	LAME is a high quality MPEG Audio Layer III (MP3) encoder licensed under the LGPL. Website
LAMMPS	2Aug2023-foss-2022b-kokkos 23Jun2022-foss-2022a	LAMMPS is a classical molecular dynamics code, and an acronym for Large-scale Atomic/Molecular Massively Parallel Simulator. LAMMPS has potentials for solid-state materials (metals, semiconductors) and soft matter (biomolecules, polymers) and coarse-grained or mesoscopic systems. It can be used to model atoms or, more generically, as a parallel particle simulator at the atomic, meso, or continuum scale. LAMMPS runs on single processors or in parallel using message-passing techniques and a spatial-decomposition of the simulation domain. The code is designed to be easy to modify or extend with new functionality. Website
LBPM	2022.08-gompi-2022a	Lattice Boltzmann Methods for Porous Media Website
LERC	4.0.0-GCCcore-12.2.0	LERC is an open-source image or raster format which supports rapid encoding and decoding for any pixel type (not just RGB or Byte). Users set the maximum compression error per pixel while encoding, so the precision of the original input image is preserved (within user defined error bounds). Website
level-zero	1.8.8 1.15.8 1.16.15
libaio	0.3.112-GCCcore-11.3.0	Asynchronous input/output library that uses the kernels native interface. Website
libarchive	3.4.3-GCCcore-10.2.0 3.5.1-GCCcore-11.2.0 3.6.1-GCCcore-11.3.0 3.6.1-GCCcore-12.2.0	Multi-format archive and compression library Website
libcerf	2.1-GCC-11 2.1-GCCcore-11	libcerf is a self-contained numeric library that provides an efficient and accurate implementation of complex error functions, along with Dawson, Faddeeva, and Voigt functions. Website
libdeflate	1.10-GCC-11 1.10-GCCcore-11 1.15-GCCcore-12.2.0	Heavily optimized library for DEFLATE/zlib/gzip compression and decompression. Website
libdrm	2.4.102-GCCcore-10.2.0 2.4.107-GCCcore-11.2.0 2.4.110-GCC-11 2.4.110-GCCcore-11 2.4.114-GCCcore-12.2.0	Direct Rendering Manager runtime library. Website
libepoxy	1.5.10-GCCcore-12.2.0	Epoxy is a library for handling OpenGL function pointer management for you Website
libevent	2.1.8 2.1.12-GCCcore-11.2.0 2.1.12-GCCcore-11.3.0 2.1.12-GCCcore-12.2.0 2.1.12	The libevent API provides a mechanism to execute a callback function when a specific event occurs on a file descriptor or after a timeout has been reached. Furthermore, libevent also support callbacks due to signals or regular timeouts. Website
libexif	0.6.24-GCCcore-11	A library for parsing, editing, and saving EXIF data. Website
libfabric	1.13.0 1.13.2-GCCcore-11.2.0 1.15.1-GCCcore-11 1.15.1-GCCcore-11.3.0	Libfabric is a core component of OFI. It is the library that defines and exports the user-space API of OFI, and is typically the only software that applications deal with directly. It works in conjunction with provider libraries, which are often integrated directly into libfabric. Website
libffi	3.2.1-GCCcore-8.3.0 3.2.1 3.3-GCCcore-10.2.0 3.4.2-GCC-11 3.4.2-GCCcore-11 3.4.2-GCCcore-11.2.0 3.4.2-GCCcore-11.3.0 3.4.2-GCCcore-12.2.0 3.4.4-GCCcore-12.2.0 3.4.4-GCCcore-13.2.0	The libffi library provides a portable, high level programming interface to various calling conventions. This allows a programmer to call any function specified by a call interface description at run-time. Website
libgd	2.3.3-GCC-11 2.3.3-GCCcore-11	GD is an open source code library for the dynamic creation of images by programmers. Website
libgdiplus	6.1-GCCcore-11	Libgdiplus is the Mono library that provides a GDI+-compatible API on non-Windows operating systems. Website
libgeotiff	1.5.1 1.6.0-GCCcore-10.2.0 1.7.0-GCCcore-11.2.0 1.7.1-GCC-11 1.7.1-GCCcore-11 1.7.1-GCCcore-12.2.0	Library for reading and writing coordinate system information from/to GeoTIFF files Website
libgit2	1.4.3-GCC-11 1.4.3-GCCcore-11	libgit2 is a portable, pure C implementation of the Git core methods provided as a re-entrant linkable library with a solid API, allowing you to write native speed custom Git applications in any language which supports C bindings. Website
libGLU	9.0.1-GCCcore-10.2.0 9.0.2-GCC-11 9.0.2-GCCcore-11 9.0.2-GCCcore-11.2.0 9.0.2-GCCcore-12.2.0	The OpenGL Utility Library (GLU) is a computer graphics library for OpenGL. Website
libglvnd	1.3.2-GCCcore-10.2.0 1.3.3-GCCcore-11.2.0 1.4.0-GCC-11 1.4.0-GCCcore-11 1.6.0-GCCcore-12.2.0	libglvnd is a vendor-neutral dispatch layer for arbitrating OpenGL API calls between multiple vendors. Website
libgsasl	1.10.0	GNU SASL is an implementation of the Simple Authentication and Security Layer framework and a few common SASL mechanisms. Website
libiconv	1.15 1.16-GCCcore-8.3.0 1.16-GCCcore-10.2.0 1.16-GCCcore-11.2.0 1.17-GCC-11 1.17-GCCcore-11 1.17-GCCcore-12.2.0	Libiconv converts from one character encoding to another through Unicode conversion Website
libidn	1.34 1.38-GCCcore-11.2.0	GNU Libidn is a fully documented implementation of the Stringprep, Punycode and IDNA specifications. Libidn's purpose is to encode and decode internationalized domain names. Website
libidn2	2.3.2-GCCcore-11.2.0	Libidn2 implements the revised algorithm for internationalized domain names called IDNA2008/TR46. Website
libjpeg-turbo	2.0.2 2.0.5-GCCcore-10.2.0 2.0.6-GCCcore-11.2.0 2.1.3-GCC-11 2.1.3-GCCcore-11 2.1.3-GCCcore-12.2.0 2.1.4-GCC-11 2.1.4-GCCcore-11 2.1.4-GCCcore-12.2.0	libjpeg-turbo is a fork of the original IJG libjpeg which uses SIMD to accelerate baseline JPEG compression and decompression. libjpeg is a library that implements JPEG image encoding, decoding and transcoding. Website
libogg	1.3.5-GCC-11 1.3.5-GCCcore-11	Ogg is a multimedia container format, and the native file and stream format for the Xiph.org multimedia codecs. Website
libopus	1.3.1-GCC-11 1.3.1-GCCcore-11	Opus is a totally open, royalty-free, highly versatile audio codec. Opus is unmatched for interactive speech and music transmission over the Internet, but is also intended for storage and streaming applications. It is standardized by the Internet Engineering Task Force (IETF) as RFC 6716 which incorporated technology from Skype’s SILK codec and Xiph.Org’s CELT codec. Website
libpciaccess	0.14-GCCcore-8.3.0 0.16-GCC-11 0.16-GCCcore-10.2.0 0.16-GCCcore-11 0.16-GCCcore-11.2.0 0.16-GCCcore-11.3.0 0.16-GCCcore-12.2.0 0.17-GCCcore-12.2.0	Generic PCI access library. Website
libpng	1.6.36 1.6.37-GCC-11 1.6.37-GCCcore-10.2.0 1.6.37-GCCcore-11 1.6.37-GCCcore-11.2.0 1.6.37-GCCcore-12.2.0 1.6.38-GCCcore-12.2.0 1.6.40-GCCcore-11	libpng is the official PNG reference library Website
libreadline	8.0-GCCcore-8.3.0 8.0-GCCcore-10.2.0 8.0 8.1-GCCcore-11.2.0 8.1.2-GCC-11 8.1.2-GCCcore-11 8.1.2-GCCcore-11.3.0 8.1.2-GCCcore-12.2.0 8.2-GCCcore-12.2.0 8.2-GCCcore-13.2.0	The GNU Readline library provides a set of functions for use by applications that allow users to edit command lines as they are typed in. Both Emacs and vi editing modes are available. The Readline library includes additional functions to maintain a list of previously-entered command lines, to recall and perhaps reedit those lines, and perform csh-like history expansion on previous commands. Website
libsndfile	1.1.0-GCC-11 1.1.0-GCCcore-11	Libsndfile is a C library for reading and writing files containing sampled sound (such as MS Windows WAV and the Apple/SGI AIFF format) through one standard library interface. Website
libsodium	1.0.18-GCC-11 1.0.18-GCCcore-11 1.0.18-GCCcore-12.2.0	Sodium is a modern, easy-to-use software library for encryption, decryption, signatures, password hashing and more. Website
libssh2	1.11.0	libssh2 is a library implementing the SSH2 protocol, available under the revised BSD license. Website
LibTIFF	4.0.10 4.1.0-GCCcore-10.2.0 4.3.0-GCC-11 4.3.0-GCCcore-11 4.3.0-GCCcore-11.2.0 4.4.0-GCCcore-12.2.0	tiff: Library and tools for reading and writing TIFF data files Website
libtirpc	1.3.1-GCCcore-10.2.0 1.3.2-GCC-11 1.3.2-GCCcore-11 1.3.2-GCCcore-11.2.0 1.3.3-GCCcore-12.2.0	Libtirpc is a port of Suns Transport-Independent RPC library to Linux. Website
libtool	2.4.6-GCCcore-8.3.0 2.4.6-GCCcore-11.2.0 2.4.7-GCCcore-11.3.0 2.4.7-GCCcore-12.2.0 2.4.7	GNU libtool is a generic library support script. Libtool hides the complexity of using shared libraries behind a consistent, portable interface. Website
libunwind	1.4.0-GCCcore-10.2.0 1.5.0-GCCcore-11.2.0 1.6.2-GCC-11 1.6.2-GCCcore-11 1.6.2-GCCcore-12.2.0	The primary goal of libunwind is to define a portable and efficient C programming interface (API) to determine the call-chain of a program. The API additionally provides the means to manipulate the preserved (callee-saved) state of each call-frame and to resume execution at any point in the call-chain (non-local goto). The API supports both local (same-process) and remote (across-process) operation. As such, the API is useful in a number of applications Website
libvorbis	1.3.7-GCC-11 1.3.7-GCCcore-11	Ogg Vorbis is a fully open, non-proprietary, patent-and-royalty-free, general-purpose compressed audio format Website
libwebp	1.3.1-GCCcore-12.2.0	WebP is a modern image format that provides superior lossless and lossy compression for images on the web. Using WebP, webmasters and web developers can create smaller, richer images that make the web faster. Website
libxc	4.2.3-intel-2020b 4.3.4-iccifort-2020.4.304 5.2.3-GCC-11 5.2.3-GCCcore-11 5.2.3-intel-compilers-2023.0.0 6.1.0-GCC-12.2.0	Libxc is a library of exchange-correlation functionals for density-functional theory. The aim is to provide a portable, well tested and reliable set of exchange and correlation functionals. Website
libxml2	2.9.8 2.9.9-GCCcore-8.3.0 2.9.10-GCCcore-10.2.0 2.9.10-GCCcore-11.2.0 2.9.13-GCC-11 2.9.13-GCCcore-11 2.9.13-GCCcore-11.3.0 2.9.13-GCCcore-12.2.0 2.10.3-GCCcore-12.2.0	Libxml2 is the XML C parser and toolchain developed for the Gnome project (but usable outside of the Gnome platform). Website
libxslt	1.1.34-GCC-11 1.1.34-GCCcore-11 1.1.37-GCCcore-12.2.0	Libxslt is the XSLT C library developed for the GNOME project (but usable outside of the Gnome platform). Website
libyaml	0.2.5-GCC-11 0.2.5-GCCcore-11 0.2.5-GCCcore-11.3.0 0.2.5-GCCcore-12.2.0	LibYAML is a YAML parser and emitter written in C. Website
LittleCMS	2.13.1-GCC-11 2.13.1-GCCcore-11 2.14-GCCcore-12.2.0	Little CMS intends to be an OPEN SOURCE small-footprint color management engine, with special focus on accuracy and performance. Website
LLVM	11.0.0-GCCcore-10.2.0 12.0.1-GCCcore-11.2.0 14.0.3-GCC-11 14.0.3-GCCcore-11 15.0.5-GCCcore-12.2.0	The LLVM Core libraries provide a modern source- and target-independent optimizer, along with code generation support for many popular CPUs (as well as some less common ones!) These libraries are built around a well specified code representation known as the LLVM intermediate representation ("LLVM IR"). The LLVM Core libraries are well documented, and it is particularly easy to invent your own language (or port an existing compiler) to use LLVM as an optimizer and code generator. Website
LMDB	0.9.29-GCC-11 0.9.29-GCCcore-11	LMDB is a fast, memory-efficient database. With memory-mapped files, it has the read performance of a pure in-memory database while retaining the persistence of standard disk-based databases. Website
load_hook	{{ no such element: dict object['versionName'] }}
Lua	5.3.5-GCCcore-10.2.0 5.4.2-GCCcore-10.2.0 5.4.4-GCC-11 5.4.4-GCCcore-11	Lua is a powerful, fast, lightweight, embeddable scripting language. Lua combines simple procedural syntax with powerful data description constructs based on associative arrays and extensible semantics. Lua is dynamically typed, runs by interpreting bytecode for a register-based virtual machine, and has automatic memory management with incremental garbage collection, making it ideal for configuration, scripting, and rapid prototyping. Website
lumerical	2016
lxml	4.9.1-GCC-11 4.9.1-GCCcore-11 4.9.2-GCCcore-12.2.0	The lxml XML toolkit is a Pythonic binding for the C libraries libxml2 and libxslt. Website
lz4	1.9.2-GCCcore-10.2.0 1.9.3-GCC-11 1.9.3-GCCcore-11 1.9.3-GCCcore-11.2.0 1.9.3-GCCcore-11.3.0 1.9.4-GCCcore-12.2.0	LZ4 is lossless compression algorithm, providing compression speed at 400 MB/s per core. It features an extremely fast decoder, with speed in multiple GB/s per core. Website
LZO	2.10-GCCcore-11.3.0	Portable lossless data compression library Website
M4	1.4.18-GCCcore-8.3.0 1.4.18-GCCcore-10.2.0 1.4.18 1.4.19-GCCcore-11.2.0 1.4.19-GCCcore-11.3.0 1.4.19-GCCcore-12.2.0 1.4.19	GNU M4 is an implementation of the traditional Unix macro processor. It is mostly SVR4 compatible although it has some extensions (for example, handling more than 9 positional parameters to macros). GNU M4 also has built-in functions for including files, running shell commands, doing arithmetic, etc. Website
maeparser	1.3.0-gompi-2022a	maeparser is a parser for Schrodinger Maestro files. Website
magma	2.6.2-foss-2022a-CUDA-11.7.0	The MAGMA project aims to develop a dense linear algebra library similar to LAPACK but for heterogeneous/hybrid architectures, starting with current Multicore+GPU systems. Website
make	4.3-GCCcore-10.2.0 4.3-GCCcore-11 4.3-GCCcore-11.2.0 4.3-GCCcore-12.2.0	GNU version of make utility Website
makeinfo	6.7-GCCcore-8.3.0-minimal	makeinfo is part of the Texinfo project, the official documentation format of the GNU project. This is a minimal build with very basic functionality. Should only be used for build dependencies. Website
Mako	1.1.3-GCCcore-10.2.0 1.1.4-GCCcore-11.2.0 1.2.0-GCC-11 1.2.0-GCCcore-11 1.2.4-GCCcore-12.2.0	A super-fast templating language that borrows the best ideas from the existing templating languages Website
Mamba	23.1.0-4	module load Mamba/23.1.0-4 & mamba init
MariaDB	10.9.3-GCC-11.3.0	MariaDB is an enhanced, drop-in replacement for MySQL. Included engines: myISAM, Aria, InnoDB, RocksDB, TokuDB, OQGraph, Mroonga. Website
materials	2017
MaterialsStudio	2023	Materials Studio is software for simulating and modeling materials. Website
matlab	2019b 2019b 2021b 2021b 2022b 2022b 2023a 2023a 2023b
matplotlib	3.5.2-foss-2022a	matplotlib is a python 2D plotting library which produces publication quality figures in a variety of hardcopy formats and interactive environments across platforms. matplotlib can be used in python scripts, the python and ipython shell, web application servers, and six graphical user interface toolkits. Website
maturin	1.1.0-GCCcore-12.2.0	This project is meant as a zero configuration replacement for setuptools-rust and milksnake. It supports building wheels for python 3.5+ on windows, linux, mac and freebsd, can upload them to pypi and has basic pypy and graalpy support. Website
MaxQuant	1.6.3.4 2.4.9.0 2.6.5.0	MaxQuant is a quantitative proteomics software package designed for analyzing large mass-spectrometric data sets. It is specifically aimed at high-resolution MS data. Several labeling techniques as well as label-free quantification are supported. Website
MCNP	default 2.7 5 6	Monte Carlo N-Particle code. Website
Mesa	20.2.1-GCCcore-10.2.0 21.1.7-GCCcore-11.2.0 22.0.3-GCC-11 22.0.3-GCCcore-11 22.2.4-GCCcore-12.2.0	Mesa is an open-source implementation of the OpenGL specification - a system for rendering interactive 3D graphics. Website
Meson	0.55.3-GCCcore-10.2.0 0.58.2-GCCcore-11.2.0 0.62.1-GCC-11 0.62.1-GCCcore-11 0.62.1-GCCcore-12.2.0 0.64.0-GCCcore-12.2.0	Meson is a cross-platform build system designed to be both as fast and as user friendly as possible. Website
METIS	5.1.0-GCC-11 5.1.0-GCCcore-10.2.0 5.1.0-GCCcore-11 5.1.0-GCCcore-11.2.0 5.1.0-GCCcore-12.2.0	METIS is a set of serial programs for partitioning graphs, partitioning finite element meshes, and producing fill reducing orderings for sparse matrices. The algorithms implemented in METIS are based on the multilevel recursive-bisection, multilevel k-way, and multi-constraint partitioning schemes. Website
metis	5.1.0 5.1.0	Serial Graph Partitioning and Fill-reducing Matrix Ordering
mfem	4.4 4.4	Lightweight, general, scalable C++ library for finite element methods
Miniconda3	23.5.2-0 23.11.0-2	Miniconda is a free minimal installer for conda. It is a small, bootstrap version of Anaconda that includes only conda, Python, the packages they depend on, and a small number of other useful packages. Website
mkl	2020.4 2023.0.0
mkl32	2023.0.0
Mono	6.12.0.122-GCCcore-11	An open source, cross-platform, implementation of C# and the CLR that is binary compatible with Microsoft.NET. Website
mosek	10.2	Mesh and Field I/O Library and Scientific Database. Website
motif	2.3.8-GCC-11 2.3.8-GCCcore-11	Motif refers to both a graphical user interface (GUI) specification and the widget toolkit for building applications that follow that specification under the X Window System on Unix and other POSIX-compliant systems. It was the standard toolkit for the Common Desktop Environment and thus for Unix. Website
MPC	1.3.1-GCCcore-12.2.0	Gnu Mpc is a C library for the arithmetic of complex numbers with arbitrarily high precision and correct rounding of the result. It extends the principles of the IEEE-754 standard for fixed precision real floating point numbers to complex numbers, providing well-defined semantics for every operation. At the same time, speed of operation at high precision is a major design goal. Website
MPFR	4.1.0-GCC-11 4.1.0-GCCcore-10.2.0 4.1.0-GCCcore-11 4.2.0-GCCcore-12.2.0	The MPFR library is a C library for multiple-precision floating-point computations with correct rounding. Website
mpi	2019.9 2021.8.0
mpi4py	3.1.4-gompi-2022b	MPI for Python (mpi4py) provides bindings of the Message Passing Interface (MPI) standard for the Python programming language, allowing any Python program to exploit multiple processors. Website
MPICH	4.2.2	MPICH is a high-performance and widely portable implementation of the Message Passing Interface (MPI) standard (MPI-1, MPI-2 and MPI-3). Website
mumps	5.2.1 5.2.1	A MUltifrontal Massively Parallel Sparse direct Solver
MUMPS	5.3.5-intel-2020b-metis 5.6.1-foss-2022b-metis	A parallel sparse direct solver Website
NASM	2.15.05-GCC-11 2.15.05-GCCcore-10.2.0 2.15.05-GCCcore-11 2.15.05-GCCcore-11.2.0 2.15.05-GCCcore-12.2.0	NASM: General-purpose x86 assembler Website
ncbi-vdb	3.0.2-gompi-2022a	The SRA Toolkit and SDK from NCBI is a collection of tools and libraries for using data in the INSDC Sequence Read Archives. Website
NCCL	2.4.8-gcccuda-2019b 2.12.12-GCC-11-CUDA-11.7.0 2.12.12-GCCcore-11-CUDA-11.7.0 2.16.2-GCCcore-12.2.0-CUDA-12.0.0	The NVIDIA Collective Communications Library (NCCL) implements multi-GPU and multi-node collective communication primitives that are performance optimized for NVIDIA GPUs. Website
ncurses	6.0 6.1-GCCcore-8.3.0 6.1 6.2-GCCcore-10.2.0 6.2-GCCcore-11.2.0 6.2 6.3-GCC-11 6.3-GCCcore-11 6.3-GCCcore-11.3.0 6.3-GCCcore-12.2.0 6.3 6.4-GCCcore-12.2.0 6.4-GCCcore-13.2.0 6.4	The Ncurses (new curses) library is a free software emulation of curses in System V Release 4.0, and more. It uses Terminfo format, supports pads and color and multiple highlights and forms characters and function-key mapping, and has all the other SYSV-curses enhancements over BSD Curses. Website
neper	4.8.2-GCC-12.2.0	Neper is a software package for polycrystal generation and meshing. Website
netCDF	4.3.3.1-intel-2020b 4.6.2-gompi-2020 4.7.1-gompic-2019b 4.7.4-gompi-2020b 4.8.1-gompi-2021b 4.8.1-iimpi-2020b 4.9.0-gompi-2022a 4.9.0-gompi-2022b 4.9.0-iimpi-2020b	NetCDF (network Common Data Form) is a set of software libraries and machine-independent data formats that support the creation, access, and sharing of array-oriented scientific data. Website
netcdf	4.9.0 4.9.0	C Libraries for the Unidata network Common Data Form
netCDF-C	4.6.3	NetCDF (network Common Data Form) is a set of software libraries and machine-independent data formats that support the creation, access, and sharing of array-oriented scientific data. Website
netCDF-Fortran	4.4.2-intel-2020b 4.5.3-gompi-2021b 4.6.0-gompi-2022b	NetCDF (network Common Data Form) is a set of software libraries and machine-independent data formats that support the creation, access, and sharing of array-oriented scientific data. Website
nettle	3.8-GCC-11 3.8-GCCcore-11	Nettle is a cryptographic library that is designed to fit easily in more or less any context: In crypto toolkits for object-oriented languages (C++, Python, Pike, ...), in applications like LSH or GNUPG, or even in kernel space. Website
networkx	2.8.4-foss-2022a 3.0-gfbf-2022b	NetworkX is a Python package for the creation, manipulation, and study of the structure, dynamics, and functions of complex networks. Website
Ninja	1.10.1-GCCcore-10.2.0 1.10.2-GCC-11 1.10.2-GCCcore-11 1.10.2-GCCcore-11.2.0 1.10.2-GCCcore-12.2.0 1.11.1-GCCcore-12.2.0	Ninja is a small build system with a focus on speed. Website
nlohmann_json	3.10.5-GCC-11 3.10.5-GCCcore-11 3.11.2-GCCcore-12.2.0	JSON for Modern C++ Website
NLopt	2.7.1-GCC-11 2.7.1-GCCcore-11 2.7.1-GCCcore-12.2.0	NLopt is a free/open-source library for nonlinear optimization, providing a common interface for a number of different free optimization routines available online as well as original implementations of various other algorithms. Website
nodejs	16.15.1-GCC-11 16.15.1-GCCcore-11 18.12.1-GCCcore-12.2.0	Node.js is a platform built on Chrome's JavaScript runtime for easily building fast, scalable network applications. Node.js uses an event-driven, non-blocking I/O model that makes it lightweight and efficient, perfect for data-intensive real-time applications that run across distributed devices. Website
NSPR	4.32-GCCcore-11.2.0 4.34-GCC-11 4.34-GCCcore-11 4.35-GCCcore-12.2.0	Netscape Portable Runtime (NSPR) provides a platform-neutral API for system level and libc-like functions. Website
NSS	3.69-GCCcore-11.2.0 3.79-GCC-11 3.79-GCCcore-11 3.85-GCCcore-12.2.0	Network Security Services (NSS) is a set of libraries designed to support cross-platform development of security-enabled client and server applications. Website
nsync	1.25.0-GCC-11 1.25.0-GCCcore-11	nsync is a C library that exports various synchronization primitives, such as mutexes Website
numactl	2.0.12-GCCcore-8.3.0 2.0.14-GCCcore-11 2.0.14-GCCcore-11.2.0 2.0.14-GCCcore-11.3.0 2.0.16-GCCcore-12.2.0	The numactl program allows you to run your application program on specific cpu's and memory nodes. It does this by supplying a NUMA memory policy to the operating system before running your program. The libnuma library provides convenient ways for you to add NUMA memory policies into your own program. Website
NVHPC	22.7-CUDA-11.7.0 23.1-CUDA-12.0.0	C, C++ and Fortran compilers included with the NVIDIA HPC SDK (previously: PGI) Website
nvofbf	2022.07	NVHPC based toolchain, including OpenMPI for MPI support, OpenBLAS (via FlexiBLAS for BLAS and LAPACK support), FFTW and ScaLAPACK. Website
nvompi	2022.07	NVHPC based compiler toolchain, including OpenMPI for MPI support. Website
occt	7.8.0-foss-2022b	Open CASCADE Technology (OCCT) is an object-oriented C++ class library designed for rapid production of sophisticated domain-specific CAD/CAM/CAE applications. Website
oclfpga	2023.0.0
OpenBabel	3.1.1-gompi-2022a	Open Babel is a chemical toolbox designed to speak the many languages of chemical data. It's an open, collaborative project allowing anyone to search, convert, analyze, or store data from molecular modeling, chemistry, solid-state materials, biochemistry, or related areas. Website
OpenBLAS	0.3.7-GCC-8.3.0 0.3.8-GCC-system 0.3.12-GCC-10.2.0 0.3.18-GCC-11.2.0 0.3.20-NVHPC-22.7-CUDA-11.7.0 0.3.21-GCC-11 0.3.21-GCC-12.2.0 0.3.21-GCCcore-11	OpenBLAS is an optimized BLAS library based on GotoBLAS2 1.13 BSD version. Website
openblas	0.3.21	An optimized BLAS library based on GotoBLAS2
opencoarrays	2.10.0	ABI to leverage the parallel programming features of the Fortran 2018 DIS
OpenCV	4.8.0-foss-2022b-contrib	OpenCV (Open Source Computer Vision Library) is an open source computer vision and machine learning software library. OpenCV was built to provide a common infrastructure for computer vision applications and to accelerate the use of machine perception in the commercial products. Includes extra modules for OpenCV from the contrib repository. Website
OpenEXR	3.1.5-GCCcore-12.2.0	OpenEXR is a high dynamic-range (HDR) image file format developed by Industrial Light & Magic for use in computer imaging applications Website
OpenFOAM	v2206-foss-2022a 11-foss-2022a	OpenFOAM is a free, open source CFD software package. OpenFOAM has an extensive range of features to solve anything from complex fluid flows involving chemical reactions, turbulence and heat transfer, to solid dynamics and electromagnetics. Website
OpenJPEG	2.5.0-GCC-11 2.5.0-GCCcore-11 2.5.0-GCCcore-12.2.0	OpenJPEG is an open-source JPEG 2000 codec written in C language. It has been developed in order to promote the use of JPEG 2000, a still-image compression standard from the Joint Photographic Experts Group (JPEG). Since may 2015, it is officially recognized by ISO/IEC and ITU-T as a JPEG 2000 Reference Software. Website
OpenMPI	3.1.4-gcccuda-2019b 4.0.5-GCC-10.2.0 4.1.1-GCC-11.2.0 4.1.4-AOCC-3.2 4.1.4-GCC-system 4.1.4-GCC-11 4.1.4-GCC-11.3.0 4.1.4-GCC-12.2.0 4.1.4-GCCcore-11 4.1.4-Intel-2020 4.1.4-NVHPC-22.7-CUDA-11.7.0	The Open MPI Project is an open source MPI-3 implementation. Website
openmpi4	4.1.4	A powerful implementation of MPI/SHMEM Website
OpenPGM	5.2.122-GCC-11 5.2.122-GCCcore-11 5.2.122-GCCcore-12.2.0	OpenPGM is an open source implementation of the Pragmatic General Multicast (PGM) specification in RFC 3208 available at www.ietf.org. PGM is a reliable and scalable multicast protocol that enables receivers to detect loss, request retransmission of lost data, or notify an application of unrecoverable loss. PGM is a receiver-reliable protocol, which means the receiver is responsible for ensuring all data is received, absolving the sender of reception responsibility. Website
OpenSees	3.6.0-foss-2022b	OpenSees is a software framework for developing applications to simulate the performance of structural and geotechnical systems subjected to earthquakes. Website
OpenSSL	1.1	The OpenSSL Project is a collaborative effort to develop a robust, commercial-grade, full-featured, and Open Source toolchain implementing the Secure Sockets Layer (SSL v2/v3) and Transport Layer Security (TLS v1) protocols as well as a full-strength general purpose cryptography library. Website
os	{{ no such element: dict object['versionName'] }}
OVITO	3.10.3	Scientific data visualization and analysis solution for particle-based simulations. Website
Pango	1.50.7-GCC-11 1.50.7-GCCcore-11 1.50.12-GCCcore-12.2.0	Pango is a library for laying out and rendering of text, with an emphasis on internationalization. Pango can be used anywhere that text layout is needed, though most of the work on Pango so far has been done in the context of the GTK+ widget toolkit. Pango forms the core of text and font handling for GTK+-2.x. Website
PAOFLOW	2.1.0 2.1.1 2.1.2	Utility to construct and operate on Hamiltonians. Website
papi	6.0.0	Performance Application Programming Interface
ParaView	5.10.1-foss-2022a-mpi 5.11.1-foss-2022b	ParaView is a scientific parallel visualizer. Website
ParMETIS	4.0.3-gompi-2021b 4.0.3-gompi-2022b 4.0.3-iimpi-2020b	ParMETIS is an MPI-based parallel library that implements a variety of algorithms for partitioning unstructured graphs, meshes, and for computing fill-reducing orderings of sparse matrices. ParMETIS extends the functionality provided by METIS and includes routines that are especially suited for parallel AMR computations and large scale numerical simulations. The algorithms implemented in ParMETIS are based on the parallel multilevel k-way graph-partitioning, adaptive repartitioning, and parallel multi-constrained partitioning schemes. Website
PCRE	8.43 8.44-GCCcore-10.2.0 8.45-GCC-11 8.45-GCCcore-11 8.45-GCCcore-11.2.0 8.45-GCCcore-12.2.0	The PCRE library is a set of functions that implement regular expression pattern matching using the same syntax and semantics as Perl 5. Website
PCRE2	10.37-GCCcore-11.2.0 10.40-GCC-11 10.40-GCCcore-11 10.40-GCCcore-11.3.0 10.40-GCCcore-12.2.0	The PCRE library is a set of functions that implement regular expression pattern matching using the same syntax and semantics as Perl 5. Website
Perl	5.30.0-GCCcore-8.3.0-minimal 5.30.0-GCCcore-8.3.0 5.32.0-GCCcore-10.2.0 5.34.0-GCCcore-11.2.0 5.34.1-GCC-11-minimal 5.34.1-GCC-11 5.34.1-GCCcore-11 5.34.1-GCCcore-11.3.0 5.36.0-GCCcore-12.2.0	Larry Wall's Practical Extraction and Report Language Website
petsc	3.18.1 3.18.1	Portable Extensible Toolkit for Scientific Computation
PETSc	3.19.2-foss-2022b	PETSc, pronounced PET-see (the S is silent), is a suite of data structures and routines for the scalable (parallel) solution of scientific applications modeled by partial differential equations. Website
petsc4py	3.19.2-foss-2022b	petsc4py are Python bindings for PETSc, the Portable, Extensible Toolchain for Scientific Computation. Website
phdf5	1.10.8 1.10.8	A general purpose library and file format for storing scientific data
Pillow	9.1.1-GCC-11 9.1.1-GCCcore-11 9.4.0-GCCcore-12.2.0	Pillow is the 'friendly PIL fork' by Alex Clark and Contributors. PIL is the Python Imaging Library by Fredrik Lundh and Contributors. Website
pixman	0.40.0-GCC-11 0.40.0-GCCcore-10.2.0 0.40.0-GCCcore-11 0.40.0-GCCcore-11.2.0 0.42.2-GCCcore-12.2.0	Pixman is a low-level software library for pixel manipulation, providing features such as image compositing and trapezoid rasterization. Important users of pixman are the cairo graphics library and the X server. Website
pkg-config	0.29.2-GCC-11 0.29.2-GCCcore-8.3.0 0.29.2-GCCcore-10.2.0 0.29.2-GCCcore-11 0.29.2-GCCcore-11.2.0 0.29.2-GCCcore-12.2.0 0.29.2	pkg-config is a helper tool used when compiling applications and libraries. It helps you insert the correct compiler options on the command line so an application can use gcc -o test test.c pkg-config --libs --cflags glib-2.0 for instance, rather than hard-coding values on where to find glib (or other libraries). Website
pkgconf	1.8.0-GCC-11 1.8.0-GCCcore-11 1.8.0-GCCcore-11.2.0 1.8.0-GCCcore-11.3.0 1.8.0-GCCcore-12.2.0 1.8.0 1.9.3-GCCcore-12.2.0 1.9.5-GCCcore-12.2.0 2.0.3-GCCcore-13.2.0	pkgconf is a program which helps to configure compiler and linker flags for development libraries. It is similar to pkg-config from freedesktop.org. Website
pkgconfig	1.5.1-GCCcore-8.3.0-Python-3.7.4 1.5.5-GCC-11-python	pkgconfig is a Python module to interface with the pkg-config command line tool Website
plasma	21.8.29	Parallel Linear Algebra Software for Multicore Architectures
PLUMED	2.8.0-foss-2022a 2.9.0-foss-2022b 2.9.0	PLUMED is an open source library for free energy calculations in molecular systems which works together with some of the most popular molecular dynamics engines. Free energy calculations can be performed as a function of many order parameters with a particular focus on biological problems, using state of the art methods such as metadynamics, umbrella sampling and Jarzynski-equation based steered MD. The software, written in C++, can be easily interfaced with both fortran and C/C++ codes. Website
pmix	4.2.1
PMIx	4.1.0-GCCcore-11.2.0 4.1.2-GCCcore-11.3.0 4.2.2-GCCcore-12.2.0	Process Management for Exascale Environments PMI Exascale (PMIx) represents an attempt to provide an extended version of the PMI standard specifically designed to support clusters up to and including exascale sizes. The overall objective of the project is not to branch the existing pseudo-standard definitions - in fact, PMIx fully supports both of the existing PMI-1 and PMI-2 APIs - but rather to (a) augment and extend those APIs to eliminate some current restrictions that impact scalability, and (b) provide a reference implementation of the PMI-server that demonstrates the desired level of scalability. Website
PnetCDF	1.12.1-gompic-2019b 1.12.3-gompi-2022b	Parallel netCDF: A Parallel I/O Library for NetCDF File Access Website
PostgreSQL	14.4-GCC-11 14.4-GCCcore-11	PostgreSQL is a powerful, open source object-relational database system. It is fully ACID compliant, has full support for foreign keys, joins, views, triggers, and stored procedures (in multiple languages). It includes most SQL:2008 data types, including INTEGER, NUMERIC, BOOLEAN, CHAR, VARCHAR, DATE, INTERVAL, and TIMESTAMP. It also supports storage of binary large objects, including pictures, sounds, or video. It has native programming interfaces for C/C++, Java, .Net, Perl, Python, Ruby, Tcl, ODBC, among others, and exceptional documentation. Website
PROJ	6.2.1 7.2.1-GCCcore-10.2.0 8.1.0-GCCcore-11.2.0 9.0.0-GCC-11 9.0.0-GCCcore-11 9.1.1-GCCcore-12.2.0	Program proj is a standard Unix filter function which converts geographic longitude and latitude coordinates into cartesian coordinates Website
protobuf	3.10.0-GCCcore-8.3.0 3.19.4-GCC-11 3.19.4-GCCcore-11 23.0-GCCcore-12.2.0	Protocol Buffers (a.k.a., protobuf) are Google's language-neutral, platform-neutral, extensible mechanism for serializing structured data. Website
protobuf-python	3.19.4-GCC-11 3.19.4-GCCcore-11 4.23.0-GCCcore-12.2.0	Python Protocol Buffers runtime library. Website
prun	2.2	job launch utility for multiple MPI families
ptscotch	7.0.1 7.0.1	Graph, mesh and hypergraph partitioning library using MPI
pybind11	2.6.0-GCCcore-10.2.0 2.7.1-GCCcore-11.2.0 2.9.2-GCC-11 2.9.2-GCCcore-11 2.10.3-GCCcore-12.2.0	pybind11 is a lightweight header-only library that exposes C++ types in Python and vice versa, mainly to create Python bindings of existing C++ code. Website
PyCairo	1.24.0-GCCcore-12.2.0	Python bindings for the cairo library Website
PyCharm	2022.3.2	PyCharm Community Edition: Python IDE for Professional Developers Website
PyGObject	3.44.1-GCCcore-12.2.0	PyGObject is a Python package which provides bindings for GObject based libraries such as GTK, GStreamer, WebKitGTK, GLib, GIO and many more. Website
pytest-flakefinder	1.1.0-GCCcore-12.2.0	Runs tests multiple times to expose flakiness. Website
pytest-rerunfailures	12.0-GCCcore-12.2.0	pytest plugin to re-run tests to eliminate flaky failures. Website
pytest-shard	0.1.2-GCCcore-12.2.0	pytest plugin to support parallelism across multiple machines. Shards tests based on a hash of their test name enabling easy parallelism across machines, suitable for a wide variety of continuous integration services. Tests are split at the finest level of granularity, individual test cases, enabling parallelism even if all of your tests are in a single file (or even single parameterized test method). Website
pytest-xdist	2.5.0-GCCcore-11 3.3.1-GCCcore-12.2.0	xdist: pytest distributed testing plugin The pytest-xdist plugin extends pytest with some unique test execution modes: * test run parallelization: if you have multiple CPUs or hosts you can use those for a combined test run. This allows to speed up development or to use special resources of remote machines. * --looponfail: run your tests repeatedly in a subprocess. After each run pytest waits until a file in your project changes and then re-runs the previously failing tests. This is repeated until all tests pass after which again a full run is performed. * Multi-Platform coverage: you can specify different Python interpreters or different platforms and run tests in parallel on all of them. Before running tests remotely, pytest efficiently “rsyncs” your program source code to the remote place. All test results are reported back and displayed to your local terminal. You may specify different Python versions and interpreters. Website
Python	2.7.15 2.7.18-GCC-11-bare 2.7.18-GCCcore-10.2.0 2.7.18-GCCcore-11.2.0-bare 2.7.18-GCCcore-12.2.0-bare 3.7.4-GCCcore-8.3.0 3.7.4 3.8.6-GCCcore-10.2.0 3.9.6-GCCcore-11.2.0-bare 3.9.6-GCCcore-11.2.0 3.10.4-GCC-11-bare 3.10.4-GCC-11 3.10.4-GCCcore-11-bare 3.10.4-GCCcore-11 3.10.4-GCCcore-11.3.0-bare 3.10.4-GCCcore-11.3.0 3.10.4-GCCcore-12.2.0-bare 3.10.4-GCCcore-12.2.0 3.10.8-GCCcore-12.2.0-bare 3.10.8-GCCcore-12.2.0 3.11.5-GCCcore-13.2.0	Python is a programming language that lets you work more quickly and integrate your systems more effectively. Website
Python-bundle	3.10.4-foss-2022a	Python distribution with a number of widely used extensions incl. NumPy, SciPy, Matplotlib, JupyterLab, MPI4PY, ... Website
Python-bundle-PyPI	2023.06-GCCcore-12.2.0	Bundle of Python packages from PyPI Website
PyTorch	1.12.1-foss-2022a-CUDA-11.7.0 1.13.1-Ma23.1-Py3.7.3 1.13.1-Py3.7.4 2.1-An23.03-CUDA-11.7.0 2.1.2-foss-2022b 2.2.0-Py3.10.8 2.3.0-Py3.10.8	Tensors and Dynamic neural networks in Python with strong GPU acceleration. PyTorch is a deep learning framework that puts Python first. Website
PyYAML	6.0-GCC-11 6.0-GCCcore-11 6.0-GCCcore-11.3.0 6.0-GCCcore-12.2.0	PyYAML is a YAML parser and emitter for the Python programming language. Website
Qhull	2020.2-GCCcore-11 2020.2-GCCcore-12.2.0	Qhull computes the convex hull, Delaunay triangulation, Voronoi diagram, halfspace intersection about a point, furthest-site Delaunay triangulation, and furthest-site Voronoi diagram. The source code runs in 2-d, 3-d, 4-d, and higher dimensions. Qhull implements the Quickhull algorithm for computing the convex hull. Website
Qt5	5.15.2-GCCcore-11.2.0 5.15.5-GCC-11 5.15.5-GCCcore-11 5.15.7-GCCcore-12.2.0	Qt is a comprehensive cross-platform C++ application framework. Website
QuantumESPRESSO	5.3a 5.3g 5.3i 5.3-iomkl-2020b 5.3 6.3-intel-2020b 6.5-intel-2020b 6.6-AFLOW 6.7-intel-2023a 6.8-intel-2023a 6.8.1-intel-2020b 6.8.1-intel-2023a 6.8.1 7.1-foss-2022a 7.1-intel-2023a 7.1 7.2-foss-2022b 7.2-intel-2023a	Quantum ESPRESSO is an integrated suite of computer codes for electronic-structure calculations and materials modeling at the nanoscale. It is based on density-functional theory, plane waves, and pseudopotentials (both norm-conserving and ultrasoft). Website
Qwt	6.2.0-GCCcore-11.2.0 6.2.0-GCCcore-12.2.0	The Qwt library contains GUI Components and utility classes which are primarily useful for programs with a technical background. Website
R	3.6.2-intel-2020b 4.2.1-foss-2022a 4.2.2-foss-2022a 4.3.2-foss-2022a	R is a free software environment for statistical computing and graphics. Website
RapidJSON	1.1.0-GCC-11 1.1.0-GCCcore-11	A fast JSON parser/generator for C++ with both SAX/DOM style API Website
RAPIDS	24.12	GPU Accelerated Data Science Website
RAxML	8.2.12-gompi-2022a-hybrid-avx2 8.2.12-gompi-2022a-mpi-avx2 8.2.12-intel-2020b-hybrid-avx2 8.2.12-intel-2023a-hybrid-avx2 8.2.12-intel-2023a-mpi-avx2	RAxML search algorithm for maximum likelihood based inference of phylogenetic trees. Website
RAxML-NG	1.0.2-gompi-2020b 1.0.2-gompi-2022a 1.1.0-GCC-11 1.2.0-gompi-2022a 1.2.0-iimpi-2023a 1.2.1-iimpi-2023a	RAxML-NG is a phylogenetic tree inference tool which uses maximum-likelihood (ML) optimality criterion. Its search heuristic is based on iteratively performing a series of Subtree Pruning and Regrafting (SPR) moves, which allows to quickly navigate to the best-known ML tree. Website
re2c	2.2-GCC-11 2.2-GCCcore-11 2.2-GCCcore-11.2.0 2.2-GCCcore-12.2.0 3.0-GCCcore-12.2.0	re2c is a free and open-source lexer generator for C and C++. Its main goal is generating fast lexers: at least as fast as their reasonably optimized hand-coded counterparts. Instead of using traditional table-driven approach, re2c encodes the generated finite state automata directly in the form of conditional jumps and comparisons. Website
ROOT	6.26.06-foss-2022a	The ROOT system provides a set of OO frameworks with all the functionality needed to handle and analyze large amounts of data in a very efficient way. Website
RStudio-Server	2022.07.2+576-foss-2022a-Java-11-R-4.2.1	This is the RStudio Server version. RStudio is a set of integrated tools designed to help you be more productive with R. The server can be started with: rserver --server-daemonize=0 --www-port=8787 If you need a database config one can be created with: MYTMP=mktemp -d && echo -e "provider=sqlitendirectory=\({MYTMP}/sqlite" > "\)/db.conf" and then used with: rserver ... --database-config-file="${MYTMP}/db.conf" Website
Rust	1.54.0-GCCcore-11.2.0 1.60.0-GCC-11 1.60.0-GCCcore-11 1.60.0-GCCcore-11.3.0 1.60.0-GCCcore-12.2.0 1.65.0-GCCcore-12.2.0	Rust is a systems programming language that runs blazingly fast, prevents segfaults, and guarantees thread safety. Website
ScaFaCoS	1.0.1-foss-2022a 1.0.4-foss-2022a 1.0.4-foss-2022b	ScaFaCoS is a library of scalable fast coulomb solvers. Website
scalapack	2.2.0 2.2.0	A subset of LAPACK routines redesigned for heterogenous computing
ScaLAPACK	2.0.2-gompic-2019b 2.1.0-gompi-2020b 2.1.0-gompi-2020 2.1.0-gompi-2021b-fb 2.2.0-gompi-2022a-fb 2.2.0-gompi-2022b-fb 2.2.0-nvompi-2022.07-fb	The ScaLAPACK (or Scalable LAPACK) library includes a subset of LAPACK routines redesigned for distributed memory MIMD parallel computers. Website
scikit-build	0.15.0-GCC-11 0.15.0-GCCcore-11 0.17.2-GCCcore-12.2.0	Scikit-Build, or skbuild, is an improved build system generator for CPython C/C++/Fortran/Cython extensions. Website
SciPy-bundle	2019.10-fosscuda-2019b-Python-3.7.4 2020.11-foss-2020b 2021.10-foss-2021b 2022.05-foss-2022a 2022.05-intel-2023a 2023.02-gfbf-2022b	Bundle of Python packages for scientific software Website
scotch	6.0.6	Graph, mesh and hypergraph partitioning library
SCOTCH	6.1.0-iimpi-2020b 7.0.1-gompi-2022a 7.0.3-gompi-2022b	Software package and libraries for sequential and parallel graph partitioning, static mapping, and sparse matrix block ordering, and sequential mesh and hypergraph partitioning. Website
SDL2	2.26.3-GCCcore-12.2.0	SDL: Simple DirectMedia Layer, a cross-platform multimedia library Website
Siesta	4.1.5-foss-2021b 4.1.5-intel-2020b	SIESTA is both a method and its computer program implementation, to perform efficient electronic structure calculations and ab initio molecular dynamics simulations of molecules and solids. Website
Silo	4.11-gompi-2021b 4.11-gompic-2019 4.11 4.11.1-gompi-2022a	Mesh and Field I/O Library and Scientific Database. Website
slepc	3.18.0 3.18.0	A library for solving large scale sparse eigenvalue problems
SLEPc	3.18.2-foss-2022b	SLEPc (Scalable Library for Eigenvalue Problem Computations) is a software library for the solution of large scale sparse eigenvalue problems on parallel computers. It is an extension of PETSc and can be used for either standard or generalized eigenproblems, with real or complex arithmetic. It can also be used for computing a partial SVD of a large, sparse, rectangular matrix, and to solve quadratic eigenvalue problems. Website
Slicer	5.6.2	A package for visualization and image analysis. Website
SNAP	2.0.1-GCC-12.2.0	Scalable Nucleotide Alignment Program -- a fast and accurate read aligner for high-throughput sequencing data Website
SNAP-ESA	9.0.0-Java-11	The Sentinel Application Platform (SNAP) is a common architecture for all Sentinel Toolboxes being jointly developed by Brockmann Consult, SkyWatch and C-S. The SNAP architecture is ideal for Earth Observation processing and analysis due to the following technological innovations: Extensibility, Portability, Modular Rich Client Platform, Generic EO Data Abstraction, Tiled Memory Management, and a Graph Processing Framework. Website
snappy	1.1.9-GCC-11 1.1.9-GCCcore-11 1.1.9-GCCcore-11.2.0 1.1.9-GCCcore-11.3.0 1.1.9-GCCcore-12.2.0	Snappy is a compression/decompression library. It does not aim for maximum compression, or compatibility with any other compression library; instead, it aims for very high speeds and reasonable compression. Website
SOCI	4.0.3-GCC-11	SOCI is a database access library for C++ that makes the illusion of embedding SQL queries in the regular C++ code, staying entirely within the Standard C++. Website
SQLite	3.27.2 3.29.0-GCCcore-8.3.0 3.29.0 3.33.0-GCCcore-10.2.0 3.36-GCCcore-11.2.0 3.38.3-GCCcore-11 3.38.3-GCCcore-11.3.0 3.38.3-GCCcore-12.2.0 3.39.4-GCCcore-12.2.0 3.43.1-GCCcore-13.2.0	SQLite: SQL Database Engine in a C Library Website
StarCCM+	2310-R8 2310 2402-R8 2402	Simcenter STAR-CCM+ is a multiphysics CFD software. Website
StringiFor	1.1.4	StringiFor is a pure Fortran library providing a strings manipulator for modern Fortran projects Website
SuiteSparse	5.7.1-intel-2020b-METIS-5.1.0 5.8.1-intel-2020b-METIS-5.1.0 5.13.0-foss-2022b-METIS-5.1.0	SuiteSparse is a collection of libraries to manipulate sparse matrices. Website
SuperLU	5.3.0-foss-2020b 5.3.0-foss-2021b 5.3.0-foss-2022b 5.3.0-intel-2020b 5.3.0-intel-2023a	SuperLU is a general purpose library for the direct solution of large, sparse, nonsymmetric systems of linear equations on high performance machines. Website
superlu	5.2.1 5.2.1	A general purpose library for the direct solution of linear equations
superlu_dist	6.4.0 6.4.0	A general purpose library for the direct solution of linear equations
SuperLU_DIST	6.4.0-intel-2020b 8.1.2-foss-2022b	SuperLU is a general purpose library for the direct solution of large, sparse, nonsymmetric systems of linear equations on high performance machines. Website
SWIG	3.0.12-Python-2.7.15 3.0.12 4.0.2-GCC-11 4.0.2-GCCcore-11 4.1.1-GCCcore-12.2.0	SWIG is a software development tool that connects programs written in C and C++ with a variety of high-level programming languages. Website
sympy	1.12-gfbf-2022b	SymPy is a Python library for symbolic mathematics. It aims to become a full-featured computer algebra system (CAS) while keeping the code as simple as possible in order to be comprehensible and easily extensible. SymPy is written entirely in Python and does not require any external libraries. Website
Szip	2.1.1-GCCcore-8.3.0 2.1.1-GCCcore-11.2.0 2.1.1-GCCcore-12.2.0 2.1.1	Szip compression software, providing lossless compression of scientific data Website
tbb	2020.4 2021.5.0-GCC-11 2021.5.0-GCCcore-11 2021.8.0 2021.10.0-GCCcore-12.2.0	Intel(R) Threading Building Blocks (Intel(R) TBB) lets you easily write parallel C++ programs that take full advantage of multicore performance, that are portable, composable and have future-proof scalability. Website
Tcl	8.6.9-GCCcore-8.3.0 8.6.9 8.6.10-GCCcore-10.2.0 8.6.11-GCCcore-11.2.0 8.6.12-GCC-system 8.6.12-GCC-11 8.6.12-GCCcore-11 8.6.12-GCCcore-11.3.0 8.6.12-GCCcore-12.2.0 8.6.13-GCCcore-12.2.0 8.6.13-GCCcore-13.2.0	Tcl (Tool Command Language) is a very powerful but easy to learn dynamic programming language, suitable for a very wide range of uses, including web and desktop applications, networking, administration, testing and many more. Website
tecplot	chorus-2022r1 rs-2021r1 360ex-2022r1	Quickly plot and animate your CFD results exactly the way you want. Analyze complex solutions, arrange multiple layouts, and communicate your results with professional images and animations. Website
templet	{{ no such element: dict object['versionName'] }}	Mesh and Field I/O Library and Scientific Database. Website
TensorFlow	1.14-Py3.7.4 2.14-Py3.10.9 2.15.0-torch2.2-Py310 2.15-Py3.11.7 2.16.1-Py3.10.8 2.17.0-An23.07 2.17.0-Py3.10.8	TensorFlow is a free and open-source software library for machine learning and artificial intelligence. Website
Tk	8.6.9 8.6.10-GCCcore-10.2.0 8.6.12-GCC-11 8.6.12-GCCcore-11 8.6.12-GCCcore-12.2.0	Tk is an open source, cross-platform widget toolchain that provides a library of basic elements for building a graphical user interface (GUI) in many different programming languages. Website
Tkinter	3.10.4-GCCcore-11	Tkinter module, built with the Python buildsystem Website
Togl	2.0-GCCcore-10.2.0 2.0-GCCcore-11	A Tcl/Tk widget for OpenGL rendering. Website
tqdm	4.64.0-GCCcore-11.3.0 4.64.1-GCCcore-12.2.0	A fast, extensible progress bar for Python and CLI Website
trilinos	13.4.0 13.4.0	A collection of libraries of numerical algorithms
trimAl	1.4.1	A tool for automated alignment trimming in large-scale phylogenetic analyses. Website
UCC	1.0.0-GCCcore-11 1.0.0-GCCcore-11.3.0 1.1.0-GCCcore-12.2.0	UCC (Unified Collective Communication) is a collective communication operations API and library that is flexible, complete, and feature-rich for current and emerging programming models and runtimes. Website
UCC-CUDA	1.0.0-GCCcore-11-CUDA-11.7.0	UCC (Unified Collective Communication) is a collective communication operations API and library that is flexible, complete, and feature-rich for current and emerging programming models and runtimes. This module adds the UCC CUDA support. Website
UCX	1.5.0 1.9.0-GCCcore-10.2.0 1.11.2-GCCcore-11.2.0 1.12.1-GCCcore-11.3.0 1.13.1-GCC-11 1.13.1-GCCcore-11 1.13.1-GCCcore-12.2.0 1.15.0	Unified Communication X An open-source production grade communication framework for data centric and high-performance applications Website
ucx	1.11.2	UCX is a communication library implementing high-performance messaging Website
UCX-CUDA	1.13.1-GCC-11-CUDA-11.7.0 1.13.1-GCC-11-CUDA-11.8.0 1.13.1-GCCcore-11-CUDA-11.7.0 1.13.1-GCCcore-11-CUDA-11.8.0 1.13.1-GCCcore-12.2.0-CUDA-11.7.0 1.13.1-GCCcore-12.2.0-CUDA-12.0.0	Unified Communication X An open-source production grade communication framework for data centric and high-performance applications This module adds the UCX CUDA support. Website
UDUNITS	2.2.28-GCC-11 2.2.28-GCCcore-11	UDUNITS supports conversion of unit specifications between formatted and binary forms, arithmetic manipulation of units, and conversion of values between compatible scales of measurement. Website
UnZip	6.0-GCCcore-11.3.0	UnZip is an extraction utility for archives compressed in .zip format (also called "zipfiles"). Although highly compatible both with PKWARE's PKZIP and PKUNZIP utilities for MS-DOS and with Info-ZIP's own Zip program, our primary objectives have been portability and non-MSDOS functionality. Website
util-linux	2.36-GCCcore-10.2.0 2.37-GCCcore-11.2.0 2.38-GCC-11 2.38-GCCcore-11 2.38-GCCcore-12.2.0 2.38.1-GCCcore-12.2.0	Set of Linux utilities Website
Valgrind	3.18.1-gompi-2021b	Valgrind: Debugging and profiling tools Website
valgrind	3.19.0	Memory debugging utilities
VASP	5.4.1-intel-2020b 5.4.4-foss-2020 5.4.4-intel-2020b 6.1.0-intel-2023a	The Vienna Ab initio Simulation Package (VASP) is a computer program for atomic scale materials modelling, e.g. electronic structure calculations and quantum-mechanical molecular dynamics, from first principles. Website
VESTA	3.5.8-gtk3	VESTA is a 3D visualization program for structured models, volumetric data such as electron/nuclear densities, and crystal morphologies. Website
visit	3.4.1-foss-2021b	VisIt is an Open Source, interactive, scalable, visualization, animation and analysis tool. Website
VisIt	3.4.1-foss-2021b	VisIt is an Open Source, interactive, scalable, visualization, animation and analysis tool. Website
Voro++	0.4.6-GCC-11 0.4.6-GCCcore-11 0.4.6-GCCcore-12.2.0	Voro++ is a software library for carrying out three-dimensional computations of the Voronoi tessellation. A distinguishing feature of the Voro++ library is that it carries out cell-based calculations, computing the Voronoi cell for each particle individually. It is particularly well-suited for applications that rely on cell-based statistics, where features of Voronoi cells (eg. volume, centroid, number of faces) can be used to analyze a system of particles. Website
VSCode	1.94.2	Visual Studio Code. Website
VTK	9.1.0-foss-2021b 9.2.2-foss-2022a 9.2.6-foss-2022b	The Visualization Toolkit (VTK) is an open-source, freely available software system for 3D computer graphics, image processing and visualization. VTK consists of a C++ class library and several interpreted interface layers including Tcl/Tk, Java, and Python. VTK supports a wide variety of visualization algorithms including: scalar, vector, tensor, texture, and volumetric methods; and advanced modeling techniques such as: implicit modeling, polygon reduction, mesh smoothing, cutting, contouring, and Delaunay triangulation. Website
vtune	vtune_profiler_2020
Wayland	1.22.0-GCCcore-12.2.0	Wayland is a project to define a protocol for a compositor to talk to its clients as well as a library implementation of the protocol. The compositor can be a standalone display server running on Linux kernel modesetting and evdev input devices, an X application, or a wayland client itself. The clients can be traditional applications, X servers (rootless or fullscreen) or other display servers. Website
X11	20201008-GCCcore-10.2.0 20210802-GCCcore-11.2.0 20220504-GCC-11 20220504-GCCcore-11 20221110-GCCcore-12.2.0	The X Window System (X11) is a windowing system for bitmap displays Website
x264	20220620-GCC-11 20220620-GCCcore-11 20220620-GCCcore-12.2.0 20230226-GCCcore-12.2.0	x264 is a free software library and application for encoding video streams into the H.264/MPEG-4 AVC compression format, and is released under the terms of the GNU GPL. Website
x265	3.5-GCC-11 3.5-GCCcore-11 3.5-GCCcore-12.2.0	x265 is a free software library and application for encoding video streams into the H.265 AVC compression format, and is released under the terms of the GNU GPL. Website
XCrySDen	1.6.2-foss-2020b 1.6.2-foss-2022a	XCrySDen is a crystalline and molecular structure visualisation program aiming at display of isosurfaces and contours, which can be superimposed on crystalline structures and interactively rotated and manipulated. Website
Xerces-C++	3.2.4-GCCcore-11 3.2.4-GCCcore-12.2.0	Xerces-C++ is a validating XML parser written in a portable subset of C++. Xerces-C++ makes it easy to give your application the ability to read and write XML data. A shared library is provided for parsing, generating, manipulating, and validating XML documents using the DOM, SAX, and SAX2 APIs. Website
XGBoost	2.1.3	XGBoost is an optimized distributed gradient boosting library designed to be highly efficient, flexible and portable. Website
xorg-macros	1.19.2-GCCcore-8.3.0 1.19.2-GCCcore-10.2.0 1.19.3-GCC-11 1.19.3-GCCcore-11 1.19.3-GCCcore-11.2.0 1.19.3-GCCcore-11.3.0 1.19.3-GCCcore-12.2.0	X.org macros utilities. Website
xprop	1.2.5-GCCcore-12.2.0	The xprop utility is for displaying window and font properties in an X server. One window or font is selected using the command line arguments or possibly in the case of a window, by clicking on the desired window. A list of properties is then given, possibly with formatting information. Website
xproto	7.0.31-GCCcore-11.2.0	X protocol and ancillary headers Website
Xvfb	21.1.3-GCC-11 21.1.3-GCCcore-11	Xvfb is an X server that can run on machines with no display hardware and no physical input devices. It emulates a dumb framebuffer using virtual memory. Website
xxd	9.0.1696-GCCcore-12.2.0	xxd is part of the VIM package and this will only install xxd, not vim! xxd converts to/from hexdumps of binary files. Website
XZ	5.2.4-GCCcore-8.3.0 5.2.4 5.2.5-GCC-11 5.2.5-GCCcore-10.2.0 5.2.5-GCCcore-11 5.2.5-GCCcore-11.2.0 5.2.5-GCCcore-11.3.0 5.2.5-GCCcore-12.2.0 5.2.7-GCCcore-12.2.0 5.4.2-GCCcore-12.2.0 5.4.4-GCCcore-13.2.0	xz: XZ utilities Website
Yambo	5.2.1-foss-2022b 5.2.3-foss-2022b	Yambo is a FORTRAN/C code for Many-Body calculations in solid state and molecular physics. Yambo relies on the Kohn-Sham wavefunctions generated by two DFT public codes: abinit, and PWscf. Website
yaml-cpp	0.7.0-GCCcore-11	yaml-cpp is a YAML parser and emitter in C++ matching the YAML 1.2 spec Website
Yasm	1.3.0-GCC-11 1.3.0-GCCcore-11 1.3.0-GCCcore-12.2.0	Yasm: Complete rewrite of the NASM assembler with BSD license Website
Z3	4.12.2-GCCcore-12.2.0-Python-3.10.8 4.12.2-GCCcore-12.2.0	Z3 is a theorem prover from Microsoft Research. Website
ZeroMQ	4.3.4-GCC-11 4.3.4-GCCcore-11 4.3.4-GCCcore-12.2.0	ZeroMQ looks like an embeddable networking library but acts like a concurrency framework. It gives you sockets that carry atomic messages across various transports like in-process, inter-process, TCP, and multicast. You can connect sockets N-to-N with patterns like fanout, pub-sub, task distribution, and request-reply. It's fast enough to be the fabric for clustered products. Its asynchronous I/O model gives you scalable multicore applications, built as asynchronous message-processing tasks. It has a score of language APIs and runs on most operating systems. Website
Zip	3.0-GCC-11 3.0-GCCcore-8.3.0 3.0-GCCcore-11 3.0-GCCcore-12.2.0	Zip is a compression and file packaging/archive utility. Although highly compatible both with PKWARE's PKZIP and PKUNZIP utilities for MS-DOS and with Info-ZIP's own UnZip, our primary objectives have been portability and other-than-MSDOS functionality Website
zlib	1.2.8-intel-2020b 1.2.11-GCCcore-8.3.0 1.2.11-GCCcore-10.2.0 1.2.11-GCCcore-11.2.0 1.2.11 1.2.12-GCC-system 1.2.12-GCC-11 1.2.12-GCCcore-11 1.2.12-GCCcore-11.3.0 1.2.12-GCCcore-12.2.0 1.2.12 1.2.13-GCCcore-12.2.0 1.2.13-GCCcore-13.2.0 1.2.13	zlib is designed to be a free, general-purpose, legally unencumbered -- that is, not covered by any patents -- lossless data-compression library for use on virtually any computer hardware and operating system. Website
zstd	1.4.5-GCCcore-10.2.0 1.5.0-GCCcore-11.2.0 1.5.2-GCC-11 1.5.2-GCCcore-11 1.5.2-GCCcore-11.3.0 1.5.2-GCCcore-12.2.0	Zstandard is a real-time compression algorithm, providing high compression ratios. It offers a very wide range of compression/speed trade-off, while being backed by a very fast decoder. It also offers a special mode for small data, called dictionary compression, and can create dictionaries from any sample set. Website